RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 GTSE1Q9NYZ3 720 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 TUBGCP4Q9UGJ1 667 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 TRIP11Q15643 1979 aa12.52□□□□□ -0.41
MRPS28-206ENST00000520946 MYBPHLA2RUH7 354 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 SFI1A8K8P3 1242 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 E9PMD0 336 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 H0YCG3 227 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
MRPS28-206ENST00000520946 MOSPD3O75425 235 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 OAZ2O95190 189 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 PAPSS2O95340 614 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-206ENST00000520946 LARGE1O95461 756 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 TRAPPC10P48553 1259 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 FCHO2Q0JRZ9 810 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 GPR17Q13304 367 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 GAS6Q14393 721 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 PDIA5Q14554 519 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 CCDC6Q16204 474 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 ECM1Q16610 540 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 SLC10A6Q3KNW5 377 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 ITPRIPL2Q3MIP1 535 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 DNAJB7Q7Z6W7 309 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-206ENST00000520946 BPIFB1Q8TDL5 484 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 CDK5RAP3Q96JB5 506 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 SEPT5Q99719 369 aaPredicted RBP12.51□□□□□ -0.41
MRPS28-206ENST00000520946 TIPINQ9BVW5 301 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 OBP2AQ9NY56 170 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 ARHGAP28Q9P2N2 729 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 UBQLN1Q9UMX0 589 aaKnown RBP12.51□□□□□ -0.41
MRPS28-206ENST00000520946 DMXL1Q9Y485 3027 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 ACACBO00763 2458 aa12.51□□□□□ -0.41
MRPS28-206ENST00000520946 K7ESF4 209 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 CLTAP09496 248 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 CXCL8P10145 99 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 ODC1P11926 461 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 CDC25CP30307 473 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 PXNP49023 591 aaPredicted RBP12.5□□□□□ -0.41
MRPS28-206ENST00000520946 TUFMP49411 452 aaKnown RBP12.5□□□□□ -0.41
MRPS28-206ENST00000520946 MYBPC2Q14324 1141 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 SF3A2Q15428 464 aaKnown RBP12.5□□□□□ -0.41
MRPS28-206ENST00000520946 KYAT1Q16773 422 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 MGAT5BQ3V5L5 792 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 STXBP5Q5T5C0 1151 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 RINT1Q6NUQ1 792 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 CC2D1AQ6P1N0 951 aaPredicted RBP12.5□□□□□ -0.41
MRPS28-206ENST00000520946 METTL23Q86XA0 190 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 LOXL4Q96JB6 756 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 TMEM209Q96SK2 561 aa12.5□□□□□ -0.41
MRPS28-206ENST00000520946 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
MRPS28-206ENST00000520946 M0QZQ0 153 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 ARNTLO00327 626 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 PLS3P13797 630 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 CYP3A5P20815 502 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 PROZP22891 400 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 HOXA6P31267 233 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 AVPR1AP37288 418 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 MCM2P49736 904 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 LIG4P49917 911 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 BFSP1Q12934 665 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 N4BP2L1Q5TBK1 243 aaPredicted RBP12.49□□□□□ -0.41
MRPS28-206ENST00000520946 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 TXNDC11Q6PKC3 985 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 ZPBP2Q6X784 338 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 DTHD1Q6ZMT9 781 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 THEM5Q8N1Q8 247 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 ATAD1Q8NBU5 361 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 TTC16Q8NEE8 873 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 BEST2Q8NFU1 509 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 GAB3Q8WWW8 586 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 PSMG2Q969U7 264 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 RSPRY1Q96DX4 576 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 RUSC1Q9BVN2 902 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 TASP1Q9H6P5 420 aa12.49□□□□□ -0.41
MRPS28-206ENST00000520946 WDR87Q6ZQQ6 2873 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 MTMR11A4FU01 709 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 EXTL3O43909 919 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 SOAT2O75908 522 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 TYMPP19971 482 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 PAX3P23760 479 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 LRPAP1P30533 357 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 LIMK1P53667 647 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 CYP4F8P98187 520 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 TNK2Q07912 1038 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 NBR1Q14596 966 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 ELF2Q15723 593 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 SLC39A12Q504Y0 691 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 STPG1Q5TH74 334 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 RNF43Q68DV7 783 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 C1orf186Q6ZWK4 172 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 GAREM2Q75VX8 874 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 TAS1R3Q7RTX0 852 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 KBTBD6Q86V97 674 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 TMC8Q8IU68 726 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 CCDC83Q8IWF9 413 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 SPIRE2Q8WWL2 714 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 TSPAN18Q96SJ8 248 aa12.48□□□□□ -0.41
MRPS28-206ENST00000520946 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms