RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MYO1CO00159 1063 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 GRPP07492 148 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 PIM1P11309 404 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 PDIA3P30101 505 aaKnown RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 WNT3P56703 355 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 PSMC1P62191 440 aaKnown RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 FOXO1Q12778 655 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 AMOTQ4VCS5 1084 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 METTL24Q5JXM2 366 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 ATXN7L2Q5T6C5 722 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 UTP14CQ5TAP6 766 aaKnown RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 ANKS6Q68DC2 871 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 DRICH1Q6PGQ1 229 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 USP37Q86T82 979 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 YAF2Q8IY57 180 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 FITM2Q8N6M3 262 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 PCSK9Q8NBP7 692 aaKnown RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZNF384Q8TF68 577 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZNF512Q96ME7 567 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 RMDN3Q96TC7 470 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 GDF15Q99988 308 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 CHST8Q9H2A9 424 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 GSTO2Q9H4Y5 243 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 AGO3Q9H9G7 860 aaKnown RBP6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 FBXO34Q9NWN3 711 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZNF69Q9UC07 566 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 ZNF212Q9UDV6 495 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 SLC39A10Q9ULF5 831 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 TMX2Q9Y320 296 aa6.34□□□□□ -1.39
HMGB1P46-201ENST00000520062 B4GALT3O60512 393 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 B4GALT4O60513 344 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 STC2O76061 302 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 INMTO95050 263 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 C1QTNF9P0C862 333 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 CYP2C9P11712 490 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 XRCC6P12956 609 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 CR2P20023 1033 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 RPS19P39019 145 aaKnown RBP6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 ZNF135P52742 658 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 SLURP1P55000 103 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 UCP3P55916 312 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 RAP2BP61225 183 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 GRM1Q13255 1194 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 FAM214AQ32MH5 1076 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 FKBP15Q5T1M5 1219 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 PPP1R32Q7Z5V6 425 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 GPR135Q8IZ08 494 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 SLC15A4Q8N697 577 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 VGLL2Q8N8G2 317 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 OR56A3Q8NH54 315 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 TRAPPC12Q8WVT3 735 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 TFAP2CQ92754 450 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 SPSB4Q96A44 273 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 GCC1Q96CN9 775 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 SPATA5L1Q9BVQ7 753 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 TMEM120AQ9BXJ8 343 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 MAGEB5Q9BZ81 275 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 C12orf65Q9H3J6 166 aaKnown RBP6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 NECTIN3Q9NQS3 549 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 USP40Q9NVE5 1235 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 SLC45A2Q9UMX9 530 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 HDAC5Q9UQL6 1122 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 MAN2B2Q9Y2E5 1009 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 PCDHGB3Q9Y5G1 929 aa6.33□□□□□ -1.4
HMGB1P46-201ENST00000520062 PRR5-ARHGAP8B1AHC4 643 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 HMGB1P1B2RPK0 211 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 SYT5O00445 386 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 WDHD1O75717 1129 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 AGFG2O95081 481 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 CD53P19397 219 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 MGAT1P26572 445 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 IL1R2P27930 398 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 VIPR2P41587 438 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 GALNT1Q10472 559 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 PPFIA1Q13136 1202 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 KCNA10Q16322 511 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 PFKFB4Q16877 469 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 CRB2Q5IJ48 1285 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 DCAF12L1Q5VU92 463 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 FAM160B1Q5W0V3 765 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 CCDC70Q6NSX1 233 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 USP17L6PQ6QN14 398 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 KRT28Q7Z3Y7 464 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 MPP5Q8N3R9 675 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 Q8N3U1 123 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 DNERQ8NFT8 737 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 MUL1Q969V5 352 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 MOGAT1Q96PD6 335 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 SLC38A3Q99624 504 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 HEPHQ9BQS7 1158 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 CNPPD1Q9BV87 410 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 LSM14BQ9BX40 385 aaKnown RBP6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 DHX36Q9H2U1 1008 aaKnown RBP6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 TMEM8AQ9HCN3 771 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 XPR1Q9UBH6 696 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 ITGB1BP2Q9UKP3 347 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 LZTS1Q9Y250 596 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 GPR52Q9Y2T5 361 aa6.32□□□□□ -1.4
HMGB1P46-201ENST00000520062 CDHR4A6H8M9 788 aa6.31□□□□□ -1.4
HMGB1P46-201ENST00000520062 M0QYG6 137 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms