RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 CCR2P41597 374 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 RPS9P46781 194 aaKnown RBP11.78□□□□□ -0.52
PVT1-208ENST00000519481 GUCY2FP51841 1108 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 LILRA4P59901 499 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 PPP2R5DQ14738 602 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 VEPH1Q14D04 833 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 POSTNQ15063 836 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 TEAD2Q15562 447 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 ITIH5Q86UX2 942 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 THEM5Q8N1Q8 247 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 ZSCAN18Q8TBC5 510 aaPredicted RBP11.78□□□□□ -0.52
PVT1-208ENST00000519481 CSGALNACT1Q8TDX6 532 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 RUBCNQ92622 972 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 SECISBP2LQ93073 1101 aaKnown RBP11.78□□□□□ -0.52
PVT1-208ENST00000519481 CLDN23Q96B33 292 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 ST6GALNAC4Q9H4F1 302 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 TRPV5Q9NQA5 729 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 SEL1LQ9UBV2 794 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 STK17AQ9UEE5 414 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 AGO2Q9UKV8 859 aaKnown RBP11.78□□□□□ -0.52
PVT1-208ENST00000519481 NDRG2Q9UN36 371 aaKnown RBP11.78□□□□□ -0.52
PVT1-208ENST00000519481 EXOC7Q9UPT5 735 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 SSUH2Q9Y2M2 353 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 VPS13AQ96RL7 3174 aa11.78□□□□□ -0.52
PVT1-208ENST00000519481 PDCD11Q14690 1871 aaKnown RBP11.78□□□□□ -0.52
PVT1-208ENST00000519481 F5P12259 2224 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 TULP1O00294 542 aaPredicted RBP11.77□□□□□ -0.53
PVT1-208ENST00000519481 DPYSL4O14531 572 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 FAM189A1O60320 539 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 GJA1P17302 382 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 TUFMP49411 452 aaKnown RBP11.77□□□□□ -0.53
PVT1-208ENST00000519481 ACOT2P49753 483 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 POU5F1Q01860 360 aaKnown RBP11.77□□□□□ -0.53
PVT1-208ENST00000519481 GRIN1Q05586 938 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 TAF12Q16514 161 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 ARHGAP15Q53QZ3 475 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 RRAGBQ5VZM2 374 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 C9orf57Q5W0N0 161 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 CENPPQ6IPU0 288 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 C1orf228Q6PIY5 440 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 VITQ6UXI7 678 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 SV2BQ7L1I2 683 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 DYMQ7RTS9 669 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 ERMP1Q7Z2K6 904 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 MFSD6LQ8IWD5 586 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 SHKBP1Q8TBC3 707 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 FAM200AQ8TCP9 573 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 POMGNT1Q8WZA1 660 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 FAM3CQ92520 227 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 MSANTD3Q96H12 275 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 ZSWIM3Q96MP5 696 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 GCNAQ96QF7 691 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 TRPV4Q9HBA0 871 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 ZNF334Q9HCZ1 680 aaPredicted RBP11.77□□□□□ -0.53
PVT1-208ENST00000519481 ZSCAN32Q9NX65 697 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 HSFX1Q9UBD0 423 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 C2CD2Q9Y426 696 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 PCDHGA2Q9Y5H1 932 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 PIAS3Q9Y6X2 628 aa11.77□□□□□ -0.53
PVT1-208ENST00000519481 A0A1W2PRU2 124 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 MTMR11A4FU01 709 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 HEPACAM2A8MVW5 462 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 ANKRD63C9JTQ0 380 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 CYB561D2O14569 222 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 MOSPD3O75425 235 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 IL18RAPO95256 599 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 CYP11A1P05108 521 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 NFICP08651 508 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 GAP43P17677 238 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 VIPR2P41587 438 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 TAF6P49848 677 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 NRLP54845 237 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 SMARCB1Q12824 385 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 ZC2HC1CQ53FD0 456 aaPredicted RBP11.76□□□□□ -0.53
PVT1-208ENST00000519481 SLC39A4Q6P5W5 647 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 DNAJB7Q7Z6W7 309 aaPredicted RBP11.76□□□□□ -0.53
PVT1-208ENST00000519481 SFR1Q86XK3 245 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 NT5DC4Q86YG4 428 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 KIAA2013Q8IYS2 634 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 MAML2Q8IZL2 1156 aaPredicted RBP11.76□□□□□ -0.53
PVT1-208ENST00000519481 TMEM130Q8N3G9 435 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 ATAD1Q8NBU5 361 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 LRRC15Q8TF66 581 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 PSMG2Q969U7 264 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 EPSTI1Q96J88 318 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 FIZ1Q96SL8 496 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 FAM126AQ9BYI3 521 aaPredicted RBP11.76□□□□□ -0.53
PVT1-208ENST00000519481 ATXN3LQ9H3M9 355 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 MRPL44Q9H9J2 332 aaKnown RBP11.76□□□□□ -0.53
PVT1-208ENST00000519481 DPP3Q9NY33 737 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 NCDNQ9UBB6 729 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 SRPRBQ9Y5M8 271 aaKnown RBP11.76□□□□□ -0.53
PVT1-208ENST00000519481 STYXL1Q9Y6J8 313 aa11.76□□□□□ -0.53
PVT1-208ENST00000519481 ANO9A1A5B4 782 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 PIRO00625 290 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 PPEF2O14830 753 aa11.75□□□□□ -0.53
PVT1-208ENST00000519481 CHADO15335 359 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms