RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 C17orf75Q9HAS0 396 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 PDLIM7Q9NR12 457 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 PGAP2Q9UHJ9 254 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 PCDHB4Q9Y5E5 795 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 ZNF541Q9H0D2 1346 aa17.53■□□□□ 0.4
PCDHGA11-202ENST00000518882 MAGEB2O15479 319 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 EXTL3O43909 919 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 CUL2Q13617 745 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 MOGSQ13724 837 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 PSMD6Q15008 389 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 ARHGEF16Q5VV41 709 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 ERP27Q96DN0 273 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 TMEM237Q96Q45 408 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 TRABDQ9H4I3 376 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 MRPL47Q9HD33 250 aaKnown RBP17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 ARHGAP28Q9P2N2 729 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 STARD13Q9Y3M8 1113 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 WDR46O15213 610 aaKnown RBP17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 RPA3P35244 121 aaPredicted RBP17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 ARSEP51690 589 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 POLGP54098 1239 aaPredicted RBP17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 ZNF252P-AS1Q0IIN9 211 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 CCDC142Q17RM4 750 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 MFSD7Q6UXD7 560 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 PHF13Q86YI8 300 aaPredicted RBP17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 MAB21L3Q8N8X9 362 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 MRRFQ96E11 262 aaKnown RBP17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 SLITRK1Q96PX8 696 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 FNBP1Q96RU3 617 aa17.52■□□□□ 0.4
PCDHGA11-202ENST00000518882 COL4A5P29400 1685 aa17.52■□□□□ 0.39
PCDHGA11-202ENST00000518882 NFASCO94856 1347 aa17.52■□□□□ 0.39
PCDHGA11-202ENST00000518882 PRPF4O43172 522 aaKnown RBP eCLIP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 FGFR1P11362 822 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 TARSP26639 723 aaKnown RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 SP4Q02446 784 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 ENPEPQ07075 957 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 GPS1Q13098 491 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 ZBTB41Q5SVQ8 909 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 SWSAP1Q6NVH7 229 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 FEZF2Q8TBJ5 459 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 FBF1Q8TES7 1133 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 ACSF2Q96CM8 615 aaPredicted RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 ZNF148Q9UQR1 794 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 KIF1CO43896 1103 aaKnown RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 BANF1O75531 89 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 LIG4P49917 911 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 YARSP54577 528 aaKnown RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 SLC8A3P57103 927 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 LACTBP83111 547 aaPredicted RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 SLC1A5Q15758 541 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 TXNRD3NBQ6F5E7 133 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 NLRX1Q86UT6 975 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 TDRPQ86YL5 185 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 ALLCQ8N6M5 410 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 RBBP8NLQ8NC74 664 aaPredicted RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 CNKSR1Q969H4 720 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 HAUS1Q96CS2 278 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 WNK4Q96J92 1243 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 VCPIP1Q96JH7 1222 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 ZBTB45Q96K62 511 aaPredicted RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 SENP7Q9BQF6 1050 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 FOXP3Q9BZS1 431 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 POLR3FQ9H1D9 316 aaPredicted RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 SEPT9Q9UHD8 586 aaPredicted RBP17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 IVNS1ABPQ9Y6Y0 642 aa17.51■□□□□ 0.39
PCDHGA11-202ENST00000518882 A0A1W2PPM1 405 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 KRT15P19012 456 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 CDC25CP30307 473 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 EAPPQ56P03 285 aaPredicted RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 ZFYVE27Q5T4F4 411 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 TRIM72Q6ZMU5 477 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 CCDC60Q8IWA6 550 aaPredicted RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 VPS37BQ9H9H4 285 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 UBN1Q9NPG3 1134 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 MAP3K20Q9NYL2 800 aaKnown RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 HAO1Q9UJM8 370 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 NUB1Q9Y5A7 615 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 SCINQ9Y6U3 715 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 COL11A1P12107 1806 aaPredicted RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 PARP14Q460N5 1801 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 EDF1O60869 148 aaKnown RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 DGAT1O75907 488 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 KRT1P04264 644 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 ATP11AP98196 1134 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 C1QBPQ07021 282 aaKnown RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 NR1H3Q13133 447 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 SPARCL1Q14515 664 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 PDK4Q16654 411 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 WDR72Q3MJ13 1102 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 BZW1Q7L1Q6 419 aaKnown RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 ZBED8Q8IZ13 594 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 LRMDAQ9H2I8 198 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 QTRT2Q9H974 415 aaKnown RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 TXLNGQ9NUQ3 528 aa17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 NKX1-2Q9UD57 310 aaPredicted RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 AGO2Q9UKV8 859 aaKnown RBP17.5■□□□□ 0.39
PCDHGA11-202ENST00000518882 RIPK3Q9Y572 518 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms