RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 CACNA1HO95180 2353 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 PTPRZ1P23471 2315 aaPredicted RBP7.12□□□□□ -1.27
CCDC6-203ENST00000518638 ATG2AQ2TAZ0 1938 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 PTPDC1A2A3K4 754 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 GH1P01241 217 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 CAPNS1P04632 268 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 SLC3A2P08195 630 aaKnown RBP7.12□□□□□ -1.27
CCDC6-203ENST00000518638 MMP3P08254 477 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 IFIT2P09913 472 aaKnown RBP7.12□□□□□ -1.27
CCDC6-203ENST00000518638 TSPY3P0CV98 308 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 TSPY8P0CW00 308 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 SRGAP2BP0DMP2 458 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 ATF7P17544 494 aaPredicted RBP7.12□□□□□ -1.27
CCDC6-203ENST00000518638 GNAT2P19087 354 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 PTGS1P23219 599 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 EDNRBP24530 442 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 RARSP54136 660 aaKnown RBP7.12□□□□□ -1.27
CCDC6-203ENST00000518638 VCPP55072 806 aaKnown RBP7.12□□□□□ -1.27
CCDC6-203ENST00000518638 SCRN1Q12765 414 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 CLUL1Q15846 466 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 PTPN21Q16825 1174 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 PLEKHG4Q58EX7 1191 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 MUM1L1Q5H9M0 696 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 GALNT18Q6P9A2 607 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 DBF4BQ8NFT6 615 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 P2RX5Q93086 422 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 GPATCH3Q96I76 525 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 IFIH1Q9BYX4 1025 aaKnown RBP7.12□□□□□ -1.27
CCDC6-203ENST00000518638 OSBPL2Q9H1P3 480 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 SEMA4AQ9H3S1 761 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 ALG13Q9NP73 1137 aaKnown RBP7.12□□□□□ -1.27
CCDC6-203ENST00000518638 PAG1Q9NWQ8 432 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 TAF6LQ9Y6J9 622 aa7.12□□□□□ -1.27
CCDC6-203ENST00000518638 FAM186AA6NE01 2351 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 ADGRA3Q8IWK6 1321 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 A0A1W2PQU0 124 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 RSPH10B2B2RC85 870 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 EIF5BO60841 1220 aaKnown RBP7.11□□□□□ -1.27
CCDC6-203ENST00000518638 BCAR3O75815 825 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 F2P00734 622 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 RSPH10BP0C881 870 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 PI3P19957 117 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 HOXC12P31275 282 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 BMPR1AP36894 532 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 PPP2R2AP63151 447 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 DLX2Q07687 328 aaPredicted RBP7.11□□□□□ -1.27
CCDC6-203ENST00000518638 CYP4F3Q08477 520 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 ADAM15Q13444 863 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 BAATQ14032 418 aaPredicted RBP7.11□□□□□ -1.27
CCDC6-203ENST00000518638 SPATS1Q496A3 300 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 TMEM63BQ5T3F8 832 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 ZNF618Q5T7W0 954 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.11□□□□□ -1.27
CCDC6-203ENST00000518638 DGLUCYQ7Z3D6 616 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 JAZF1Q86VZ6 243 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 DHX37Q8IY37 1157 aaKnown RBP7.11□□□□□ -1.27
CCDC6-203ENST00000518638 UBALD2Q8IYN6 164 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 TRMT2AQ8IZ69 625 aaKnown RBP7.11□□□□□ -1.27
CCDC6-203ENST00000518638 ADSSL1Q8N142 457 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 EFHBQ8N7U6 833 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 IL17RAQ96F46 866 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 MSLNLQ96KJ4 702 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 RIPOR3Q96MK2 946 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 CTAGE1Q96RT6 745 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 PLCD4Q9BRC7 762 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 CRTAC1Q9NQ79 661 aa7.11□□□□□ -1.27
CCDC6-203ENST00000518638 TRBV23OR9-2A0A075B6M9 112 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 SCG5P05408 212 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 THBDP07204 575 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 TDO2P48775 406 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 AFF3P51826 1226 aaKnown RBP7.1□□□□□ -1.27
CCDC6-203ENST00000518638 PUM1Q14671 1186 aaKnown RBP eCLIP7.1□□□□□ -1.27
CCDC6-203ENST00000518638 RNF207Q6ZRF8 634 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 FEZF2Q8TBJ5 459 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 DCAF4Q8WV16 495 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 AFG1LQ8WV93 481 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 KIF1BPQ96EK5 621 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 CCDC140Q96MF4 163 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 CDCA3Q99618 268 aaPredicted RBP7.1□□□□□ -1.27
CCDC6-203ENST00000518638 NACAP1Q9BZK3 213 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 RANBP17Q9H2T7 1088 aaKnown RBP7.1□□□□□ -1.27
CCDC6-203ENST00000518638 HDAC6Q9UBN7 1215 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 ACSL6Q9UKU0 697 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 NR2E1Q9Y466 385 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 USP15Q9Y4E8 981 aaPredicted RBP7.1□□□□□ -1.27
CCDC6-203ENST00000518638 CFAP54Q96N23 3096 aa7.1□□□□□ -1.27
CCDC6-203ENST00000518638 KIAA1217Q5T5P2 1943 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 WDR19Q8NEZ3 1342 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 CACNA1BQ00975 2339 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 HAS3O00219 553 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 SNRPB2P08579 225 aaKnown RBP7.09□□□□□ -1.27
CCDC6-203ENST00000518638 GNAT1P11488 350 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 ATP5JP18859 108 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 PAMP19021 973 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 SDHBP21912 280 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 MCCP23508 829 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 CALML3P27482 149 aa7.09□□□□□ -1.27
CCDC6-203ENST00000518638 L1CAMP32004 1257 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms