RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 GCN1Q92616 2671 aaKnown RBP10.8□□□□□ -0.68
SH2D4A-202ENST00000518040 DMXL2Q8TDJ6 3036 aa10.8□□□□□ -0.68
SH2D4A-202ENST00000518040 LAMA1P25391 3075 aa10.8□□□□□ -0.68
SH2D4A-202ENST00000518040 UPK3BL1B0FP48 263 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 UPK3BL2E5RIL1 263 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 CPB1P15086 417 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 HOXC13P31276 330 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 DPP6P42658 865 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 MCM2P49736 904 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 RARRES1P49788 294 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 YARSP54577 528 aaKnown RBP10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 HNRNPDQ14103 355 aaKnown RBP10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 UAP1L1Q3KQV9 507 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 USP39Q53GS9 565 aaKnown RBP10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 GLRA4Q5JXX5 417 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 PMS2CLQ68D20 193 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 KIAA1211LQ6NV74 962 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 PKN3Q6P5Z2 889 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 CYP2U1Q7Z449 544 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 FBXL16Q8N461 479 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 TTC8Q8TAM2 541 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 ACDQ96AP0 544 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 LRRC3Q9BY71 257 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 KLK13Q9UKR3 277 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 YIPF1Q9Y548 306 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 NBEAQ8NFP9 2946 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 EML5Q05BV3 1969 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 SMIM28A0A1B0GU29 152 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 CCDC194A0A1B0GVG4 234 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 PODXLO00592 558 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 RNF40O75150 1001 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 DEXIO95424 95 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 ALDH1A3P47895 512 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 ADCK5Q3MIX3 580 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 Q6ZUG5 572 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 TMC8Q8IU68 726 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 BEST2Q8NFU1 509 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 HAS1Q92839 578 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 BRF1Q92994 677 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 ZFYVE19Q96K21 471 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 HHIPQ96QV1 700 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 HSD17B14Q9BPX1 270 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 EIF2AK1Q9BQI3 630 aaKnown RBP10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 NUSAP1Q9BXS6 441 aaKnown RBP10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 CXCL16Q9H2A7 254 aa10.79□□□□□ -0.68
SH2D4A-202ENST00000518040 NUP210Q8TEM1 1887 aaPredicted RBP10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 CCNT1O60563 726 aaKnown RBP10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 IGFBP6P24592 240 aaPredicted RBP10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 MARCKSP29966 332 aaPredicted RBP10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 SIM1P81133 766 aaPredicted RBP10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 TNK2Q07912 1038 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 SSRP1Q08945 709 aaKnown RBP10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 RUNX3Q13761 415 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 PPP2R5AQ15172 486 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 ZNF423Q2M1K9 1284 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 XKR4Q5GH76 650 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 FSTL4Q6MZW2 842 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 ITIH5Q86UX2 942 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 GLIS3Q8NEA6 775 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 SUSD3Q96L08 255 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 MKNK1Q9BUB5 465 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 CCDC94Q9BW85 323 aaPredicted RBP10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 ATXN3LQ9H3M9 355 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 GOLGA2P5Q9HBQ8 144 aa10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 FLNBO75369 2602 aaKnown RBP10.78□□□□□ -0.68
SH2D4A-202ENST00000518040 AKAP13Q12802 2813 aa10.77□□□□□ -0.68
SH2D4A-202ENST00000518040 USO1O60763 962 aaKnown RBP10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 CAPNS1P04632 268 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 EFNA5P52803 228 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 IRX4P78413 519 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 GPR158Q5T848 1215 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 RNF19BQ6ZMZ0 732 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 DDX12PQ92771 950 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 LRRC3BQ96PB8 259 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 TASP1Q9H6P5 420 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 HSFX1Q9UBD0 423 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 PCDHA12Q9UN75 941 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 NUP205Q92621 2012 aa10.77□□□□□ -0.69
SH2D4A-202ENST00000518040 DCLK1O15075 740 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 MEFVO15553 781 aaPredicted RBP10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 ATP2B1P20020 1258 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 MCM4P33991 863 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 GRM5P41594 1212 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 NAMPTP43490 491 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 DGKEP52429 567 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 FOXK1P85037 733 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 DMC1Q14565 340 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 COL28A1Q2UY09 1125 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 ATF7IP2Q5U623 682 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 C19orf48Q6RUI8 117 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 DEPTORQ8TB45 409 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 PSMG2Q969U7 264 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 GCNAQ96QF7 691 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 NACC1Q96RE7 527 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 FAM83CQ9BQN1 747 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 CCDC113Q9H0I3 377 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 GKN1Q9NS71 199 aa10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.76□□□□□ -0.69
SH2D4A-202ENST00000518040 ASH1LQ9NR48 2969 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms