RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 OSBP2Q969R2 916 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 MTMR8Q96EF0 704 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 HIC2Q96JB3 615 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 IPO9Q96P70 1041 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 THUMPD2Q9BTF0 503 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 DDX23Q9BUQ8 820 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 IFIH1Q9BYX4 1025 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 MKRN2Q9H000 416 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 KLHL25Q9H0H3 589 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 CCDC8Q9H0W5 538 aaPredicted RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 MKNK2Q9HBH9 465 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 LTB4R2Q9NPC1 389 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 MBNL3Q9NUK0 354 aaKnown RBP3.95□□□□□ -1.78
CPNE3-204ENST00000517862 ZNF451Q9Y4E5 1061 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 NUP205Q92621 2012 aa3.95□□□□□ -1.78
CPNE3-204ENST00000517862 MCM3APO60318 1980 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 SCN10AQ9Y5Y9 1956 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 SIPA1L1O43166 1804 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 KIAA1671Q9BY89 1806 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 C19orf81C9J6K1 198 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 KCNAB3O43448 404 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 PRC1O43663 620 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 TLX3O43711 291 aaPredicted RBP3.94□□□□□ -1.78
CPNE3-204ENST00000517862 CAVIN2O95810 425 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 SCGB1D2O95969 90 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 PGK2P07205 417 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 SLFN14P0C7P3 912 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 FTH1P19P0C7X4 201 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 CCR3P51677 355 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 NEK4P51957 841 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 SUMO1P63165 101 aaKnown RBP3.94□□□□□ -1.78
CPNE3-204ENST00000517862 TLE3Q04726 772 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 MTMR1Q13613 665 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 PPP2R5AQ15172 486 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 IGFBP7Q16270 282 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 FSCN1Q16658 493 aaKnown RBP3.94□□□□□ -1.78
CPNE3-204ENST00000517862 BBS9Q3SYG4 887 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 ZC3H12BQ5HYM0 836 aaKnown RBP3.94□□□□□ -1.78
CPNE3-204ENST00000517862 MPZL3Q6UWV2 235 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 NSMFQ6X4W1 530 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 CCDC149Q6ZUS6 474 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 CACNA2D4Q7Z3S7 1137 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 PIP4P1Q86T03 277 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 KBTBD6Q86V97 674 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 MARCH9Q86YJ5 346 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 MRPL41Q8IXM3 137 aaKnown RBP3.94□□□□□ -1.78
CPNE3-204ENST00000517862 FBXO15Q8NCQ5 510 aaPredicted RBP3.94□□□□□ -1.78
CPNE3-204ENST00000517862 CASP10Q92851 521 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 PMM1Q92871 262 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 CCDC74BQ96LY2 380 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 MRPL4Q9BYD3 311 aaKnown RBP3.94□□□□□ -1.78
CPNE3-204ENST00000517862 ASPSCR1Q9BZE9 553 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 ANKRD2Q9GZV1 360 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 TRIM39Q9HCM9 518 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 CYP4F12Q9HCS2 524 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 SLC2A4RGQ9NR83 387 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 MAPRE3Q9UPY8 281 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 MYRFQ9Y2G1 1151 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 TNPO3Q9Y5L0 923 aaKnown RBP3.94□□□□□ -1.78
CPNE3-204ENST00000517862 PHLPP2Q6ZVD8 1323 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 CLSPNQ9HAW4 1339 aa3.94□□□□□ -1.78
CPNE3-204ENST00000517862 LOC102724159A0A0B4J2E5 919 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 CCDC163A0A0D9SF12 145 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 ALG1L2C9J202 215 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 SNAP23O00161 211 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 SHOXO15266 292 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 TSPAN6O43657 245 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 OPA1O60313 960 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 EIF4EBP3O60516 100 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 RNGTTO60942 597 aaKnown RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 AGFG2O95081 481 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 KCNH1O95259 989 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 RASGRP1O95267 797 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 SNAI1O95863 264 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 HMOX1P09601 288 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 NAT2P11245 290 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 AFMP43652 599 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 USP11P51784 963 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 ZNF143P52747 638 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 NKX3-2P78367 333 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 TMPRSS15P98073 1019 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 CREB5Q02930 508 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 PRKCQQ04759 706 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 MCL1Q07820 350 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 ACVR2BQ13705 512 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 SLBPQ14493 270 aaKnown RBP eCLIP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 PWP2Q15269 919 aaKnown RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 MLF2Q15773 248 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 NFE2Q16621 373 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 PRSS53Q2L4Q9 553 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 PREPLQ4J6C6 727 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 DUSP27Q5VZP5 1158 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 SLC6A19Q695T7 634 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 PAOXQ6QHF9 649 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 HID1Q8IV36 788 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 SCUBE1Q8IWY4 988 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 C12orf76Q8N812 135 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 RIN3Q8TB24 985 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 CAGE1Q8TC20 777 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 COG1Q8WTW3 980 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms