RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 NOLC1Q14978 699 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SAFBQ15424 915 aaKnown RBP eCLIP9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ZC2HC1CQ53FD0 456 aaPredicted RBP9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TPGS2Q68CL5 300 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 HAUS3Q68CZ6 603 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PDXDC1Q6P996 788 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ELMSAN1Q6PJG2 1045 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ZNF852Q6ZMS4 543 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ARID3BQ8IVW6 561 aaPredicted RBP9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 MFSD6LQ8IWD5 586 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 KCNN1Q92952 543 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 LPIN3Q9BQK8 851 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TCHPQ9BT92 498 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TRMT61BQ9BVS5 477 aaKnown RBP9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 BRD9Q9H8M2 597 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ZFP14Q9HCL3 533 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 GTSE1Q9NYZ3 720 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CCL26Q9Y258 94 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PCDHGA2Q9Y5H1 932 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.97
SCARNA20.3-201ENST00000516913 A0A0B4J269 797 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 VWA3AA6NCI4 1184 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CHURC1-FNTBB4DL54 471 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PIRO00625 290 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TRAPPC3O43617 180 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 EXTL3O43909 919 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 KINO60870 393 aaKnown RBP9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PIGRP01833 764 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 LRG1P02750 347 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PSMC3P17980 439 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 RFX1P22670 979 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 MCM4P33991 863 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 FNTBP49356 437 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 GPR15P49685 360 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CYP4F8P98187 520 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PFKPQ01813 784 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 MCM6Q14566 821 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PUM1Q14671 1186 aaKnown RBP eCLIP9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SPATA1Q5VX52 437 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 C9orf57Q5W0N0 161 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 KRT79Q5XKE5 535 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 JADE1Q6IE81 842 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ZPBP2Q6X784 338 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 HAUS6Q7Z4H7 955 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 DNAJB7Q7Z6W7 309 aaPredicted RBP9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 EFCAB13Q8IY85 973 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 FAM3CQ92520 227 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 DNASE1L2Q92874 299 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TMX3Q96JJ7 454 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SENP8Q96LD8 212 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 STRA6Q9BX79 667 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SLC46A2Q9BY10 475 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TRPV5Q9NQA5 729 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 HPS4Q9NQG7 708 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SLC38A7Q9NVC3 462 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CPSF3Q9UKF6 684 aaKnown RBP9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TBX20Q9UMR3 447 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 RBM19Q9Y4C8 960 aaKnown RBP9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 MIA3Q5JRA6 1907 aa9.01□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SCN1AP35498 2009 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ANKRD11Q6UB99 2663 aaPredicted RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 MYBPHLA2RUH7 354 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TADA3O75528 432 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CLTAP09496 248 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 HMGA1P17096 107 aaKnown RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ELF1P32519 619 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PXNP49023 591 aaPredicted RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ACOT2P49753 483 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 YARSP54577 528 aaKnown RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SPEM2Q0P670 501 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CCINQ13939 588 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 DHX8Q14562 1220 aaKnown RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 KARSQ15046 597 aaKnown RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SDHAF4Q5VUM1 108 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ZNF280DQ6N043 979 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 DTHD1Q6ZMT9 781 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PDZD4Q76G19 769 aaPredicted RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 OSTM1Q86WC4 334 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 DRC1Q96MC2 740 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 ZNF512Q96ME7 567 aaPredicted RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SLC22A12Q96S37 553 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TOPORSQ9NS56 1045 aaPredicted RBP9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 NUB1Q9Y5A7 615 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 NME7Q9Y5B8 376 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CACNA1EQ15878 2313 aa9□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TICRRQ7Z2Z1 1910 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PKD1L2Q7Z442 2459 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 GON4LQ3T8J9 2241 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 A0A087X0B3 334 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 SPECC1L-ADORA2AF8WAN1 911 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 H7C4K7 107 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 TM4SF5O14894 197 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CLDN3O15551 220 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PPP1R37O75864 691 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CHRM1P11229 460 aaPredicted RBP8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CPB1P15086 417 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 PLCG1P19174 1290 aa8.99□□□□□ -0.97
SCARNA20.3-201ENST00000516913 CYP3A5P20815 502 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms