RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 HLA-DQA1Q5Y7H0 255 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 HIBCHQ6NVY1 386 aaPredicted RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 TTI2Q6NXR4 508 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 MPZL3Q6UWV2 235 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 CYB5R4Q7L1T6 521 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 TRPM8Q7Z2W7 1104 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 COL23A1Q86Y22 540 aaPredicted RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 IFNL3Q8IZI9 196 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 GUF1Q8N442 669 aaKnown RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 NAT16Q8N8M0 369 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 KLHDC4Q8TBB5 520 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 MICAL1Q8TDZ2 1067 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 MORC4Q8TE76 937 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 ZNF483Q8TF39 744 aaPredicted RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 FBXO41Q8TF61 875 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 ATXN2LQ8WWM7 1075 aaKnown RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 IFT81Q8WYA0 676 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 SEC14L1Q92503 715 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 SPDL1Q96EA4 605 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 CALML4Q96GE6 196 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 CNOT6LQ96LI5 555 aaKnown RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 NAP1L4Q99733 375 aaKnown RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 PUS7LQ9H0K6 701 aaKnown RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 PLEKHA4Q9H4M7 779 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 PPP1R1BQ9UD71 204 aaPredicted RBP6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 BAIAP2L1Q9UHR4 511 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 NFU1Q9UMS0 254 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 EMC9Q9Y3B6 208 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 LAMB4A4D0S4 1761 aa6.89□□□□□ -1.31
RN7SKP248-201ENST00000516278 MYO5AQ9Y4I1 1855 aaKnown RBP6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 AFDNP55196 1824 aaKnown RBP6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 TJP1Q07157 1748 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 XDHP47989 1333 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 NOTOA8MTQ0 251 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 ERVV-2B6SEH9 535 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 hCG_1984214I3L0E3 225 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 FGF10O15520 208 aaPredicted RBP6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 PSPNO60542 156 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 SRGAP2O75044 1071 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 USP2O75604 605 aaPredicted RBP6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 NPTXRO95502 500 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 ANP32DO95626 131 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 GGPS1O95749 300 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 BAG3O95817 575 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 CSF1RP07333 972 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 SLC5A1P13866 664 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 PDE6AP16499 860 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 ALDH3A1P30838 453 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 HSD17B3P37058 310 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 GCLCP48506 637 aaPredicted RBP6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 RAB33AQ14088 237 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 SLC18A3Q16572 532 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 PARP6Q2NL67 630 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 KRT71Q3SY84 523 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 TIGD5Q53EQ6 642 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 CYP2R1Q6VVX0 501 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 EEPD1Q7L9B9 569 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 LRP10Q7Z4F1 713 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 PIGWQ7Z7B1 504 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 C2CD5Q86YS7 1000 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 ZNF713Q8N859 430 aaPredicted RBP6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 SMC1BQ8NDV3 1235 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 NSMCE1Q8WV22 266 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 LPIN2Q92539 896 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 ZBTB9Q96C00 473 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 ARMC5Q96C12 935 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 PPP1R14BQ96C90 147 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 TLCD1Q96CP7 247 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 LIN37Q96GY3 246 aaPredicted RBP6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 EPSTI1Q96J88 318 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 TRAPPC9Q96Q05 1148 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 XPO6Q96QU8 1125 aaKnown RBP6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 TSC22D3Q99576 134 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 TLR10Q9BXR5 811 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 FAM192AQ9GZU8 254 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 RNF32Q9H0A6 362 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 VCX3BQ9H321 246 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 NDST4Q9H3R1 872 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 PPCSQ9HAB8 311 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 VCX3AQ9NNX9 186 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 USP40Q9NVE5 1235 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 APEX2Q9UBZ4 518 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 GPR160Q9UJ42 338 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 FBXL5Q9UKA1 691 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 HDAC9Q9UKV0 1011 aa6.88□□□□□ -1.31
RN7SKP248-201ENST00000516278 ARFGEF2Q9Y6D5 1785 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 AFF2P51816 1311 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 CCDC194A0A1B0GVG4 234 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 TTC36A6NLP5 189 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 B4DLN1 442 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 AURKAO14965 403 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 RGS16O15492 202 aaPredicted RBP6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 SUSD5O60279 629 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 CTNND1O60716 968 aaKnown RBP6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 DTNBO60941 627 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 PPFIA2O75334 1257 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 GJB6O95452 261 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 NQO1P15559 274 aaKnown RBP6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 PHKG2P15735 406 aa6.87□□□□□ -1.31
RN7SKP248-201ENST00000516278 DRD4P21917 467 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms