RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 DDX39BQ13838 428 aaKnown RBP11.53□□□□□ -0.56
TRIM41-209ENST00000515834 CASP8Q14790 479 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 NECTIN1Q15223 517 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 PLEKHH3Q7Z736 793 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 LINC00116Q8NCU8 138 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 DDI1Q8WTU0 396 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 FBXO32Q969P5 355 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 PAWRQ96IZ0 340 aaKnown RBP11.53□□□□□ -0.56
TRIM41-209ENST00000515834 ITGB3P05106 788 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 DPYDQ12882 1025 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 MAPRE2Q15555 327 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 IFNEQ86WN2 208 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 CACUL1Q86Y37 369 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 SLC44A2Q8IWA5 706 aaPredicted RBP11.53□□□□□ -0.56
TRIM41-209ENST00000515834 HPDLQ96IR7 371 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 TMEM117Q9H0C3 514 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 TMEM39AQ9NV64 488 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 SPACA6W5XKT8 324 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 CDHR2Q9BYE9 1310 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 ESYT3A0FGR9 886 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 PGK2P07205 417 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 NT5C2P49902 561 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 STILQ15468 1287 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 SNRNP35Q16560 246 aaKnown RBP11.53□□□□□ -0.56
TRIM41-209ENST00000515834 DEFB132Q7Z7B7 95 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 FAM118BQ9BPY3 351 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 OSBPL3Q9H4L5 887 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 IL1RL2Q9HB29 575 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 MTMR4Q9NYA4 1195 aa11.53□□□□□ -0.56
TRIM41-209ENST00000515834 HPGDP15428 266 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 LVRNQ6Q4G3 990 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 RPRD1AQ96P16 312 aaPredicted RBP11.52□□□□□ -0.56
TRIM41-209ENST00000515834 MOV10L1Q9BXT6 1211 aaKnown RBP11.52□□□□□ -0.56
TRIM41-209ENST00000515834 YY1AP1Q9H869 796 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 METTL5Q9NRN9 209 aaKnown RBP11.52□□□□□ -0.56
TRIM41-209ENST00000515834 FBXO10Q9UK96 956 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 APPL1Q9UKG1 709 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 FHOD1Q9Y613 1164 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 V9GYQ6 96 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 STK36Q9NRP7 1315 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 CYTH3O43739 400 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 VCLP18206 1134 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 C12orf60Q5U649 245 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 SARM1Q6SZW1 724 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 SRBD1Q8N5C6 995 aaKnown RBP11.52□□□□□ -0.56
TRIM41-209ENST00000515834 DIS3LQ8TF46 1054 aaKnown RBP11.52□□□□□ -0.56
TRIM41-209ENST00000515834 ANKRD49Q8WVL7 239 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 CCDC3Q9BQI4 270 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 USE1Q9NZ43 259 aa11.52□□□□□ -0.56
TRIM41-209ENST00000515834 CRB1P82279 1406 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 KRT8P05787 483 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 RFC5P40937 340 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 RCOR2Q8IZ40 523 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 BLOC1S5Q8TDH9 187 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 SPACA7Q96KW9 195 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 PI4K2AQ9BTU6 479 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 VCPKMTQ9H867 229 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 GBA2Q9HCG7 927 aaPredicted RBP11.52□□□□□ -0.57
TRIM41-209ENST00000515834 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.57
TRIM41-209ENST00000515834 F5H5T6 163 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 MAN1A2O60476 641 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 CARSP49589 748 aaKnown RBP11.52□□□□□ -0.57
TRIM41-209ENST00000515834 TAF6P49848 677 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 ORC1Q13415 861 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 MTM1Q13496 603 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 LAMB3Q13751 1172 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 TOB2Q14106 344 aaPredicted RBP11.52□□□□□ -0.57
TRIM41-209ENST00000515834 HORMAD1Q86X24 394 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 WWOXQ9NZC7 414 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 ADGBQ8N7X0 1667 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 VGLL3A8MV65 326 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 AP3B1O00203 1094 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 SERPINI2O75830 405 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 KLRC2P26717 231 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 MTFR1Q15390 333 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 SEZ6Q53EL9 994 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 VN1R5Q7Z5H4 357 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF555Q8NEP9 628 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 CHST13Q8NET6 341 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 INPP5DQ92835 1189 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 CD2BP2O95400 341 aaKnown RBP11.52□□□□□ -0.57
TRIM41-209ENST00000515834 VTNP04004 478 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 ACADSBP45954 432 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 EPHB3P54753 998 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 CAMK2GQ13555 558 aaPredicted RBP11.52□□□□□ -0.57
TRIM41-209ENST00000515834 P3H1Q32P28 736 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 SIX5Q8N196 739 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 CPB2Q96IY4 423 aa11.52□□□□□ -0.57
TRIM41-209ENST00000515834 AVPR1AP37288 418 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 ZNF543Q08ER8 600 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 LRRC23Q53EV4 343 aaPredicted RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 CENPPQ6IPU0 288 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 ICA1LQ8NDH6 482 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 AHCYL2Q96HN2 611 aaKnown RBP11.51□□□□□ -0.57
TRIM41-209ENST00000515834 OSBPL9Q96SU4 736 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 REEP2Q9BRK0 252 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 WDCPQ9H6R7 721 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 DPP3Q9NY33 737 aa11.51□□□□□ -0.57
TRIM41-209ENST00000515834 PKD2L2Q9NZM6 624 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms