RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 SMC2O95347 1197 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 CPB1P15086 417 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 MYBPC2Q14324 1141 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 PSMD6Q15008 389 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 LMBRD2Q68DH5 695 aaPredicted RBP20.9■□□□□ 0.94
LMNA-225ENST00000515824 OTOP3Q7RTS5 596 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 SLC9A9Q8IVB4 645 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 PLCD3Q8N3E9 789 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 GUF1Q8N442 669 aaKnown RBP20.9■□□□□ 0.94
LMNA-225ENST00000515824 KHSRPQ92945 711 aaKnown RBP eCLIP20.9■□□□□ 0.94
LMNA-225ENST00000515824 ACSF2Q96CM8 615 aaPredicted RBP20.9■□□□□ 0.94
LMNA-225ENST00000515824 BORCS6Q96GS4 357 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 MFSD14AQ96MC6 490 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 GSDMAQ96QA5 445 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 AFF4Q9UHB7 1163 aaKnown RBP20.9■□□□□ 0.94
LMNA-225ENST00000515824 MAPK8IP1Q9UQF2 711 aa20.9■□□□□ 0.94
LMNA-225ENST00000515824 MTCL1Q9Y4B5 1905 aaKnown RBP20.89■□□□□ 0.93
LMNA-225ENST00000515824 C2CD4DB7Z1M9 353 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 PI4K2BG5E9Z4 385 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 PRRG1O14668 218 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 CCL16O15467 120 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 DCXO43602 365 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 KINO60870 393 aaKnown RBP20.89■□□□□ 0.93
LMNA-225ENST00000515824 ELOA2Q8IYF1 753 aaPredicted RBP20.89■□□□□ 0.93
LMNA-225ENST00000515824 THEM5Q8N1Q8 247 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 TDRD5Q8NAT2 981 aaKnown RBP20.89■□□□□ 0.93
LMNA-225ENST00000515824 OR5B17Q8NGF7 314 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 SMARCE1Q969G3 411 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 EPHX3Q9H6B9 360 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 CYP4F11Q9HBI6 524 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 DMAC2Q9NW81 257 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 POLIQ9UNA4 740 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 TRAF3IP3Q9Y228 551 aa20.89■□□□□ 0.93
LMNA-225ENST00000515824 GADD45BO75293 160 aaPredicted RBP20.88■□□□□ 0.93
LMNA-225ENST00000515824 NR3C1P04150 777 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 POU2F2P09086 479 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 ADCY1Q08828 1119 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 MYO1EQ12965 1108 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 TCEAL8Q8IYN2 117 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 ZDHHC14Q8IZN3 488 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 CXorf38Q8TB03 319 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 FAM84AQ96KN4 292 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 CGRRF1Q99675 332 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 SIX4Q9UIU6 781 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 FRMD4BQ9Y2L6 1034 aa20.88■□□□□ 0.93
LMNA-225ENST00000515824 CLUHO75153 1309 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 PTPRJQ12913 1337 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 HUS1O60921 280 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 LRG1P02750 347 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 BFSP1Q12934 665 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 GPR17Q13304 367 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 WSCD1Q658N2 575 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 TRAPPC11Q7Z392 1133 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 C1QTNF1Q9BXJ1 281 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 GTPBP4Q9BZE4 634 aaKnown RBP20.87■□□□□ 0.93
LMNA-225ENST00000515824 MUTYHQ9UIF7 546 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 PCDHA5Q9Y5H7 936 aa20.87■□□□□ 0.93
LMNA-225ENST00000515824 OR4Q2P0C623 313 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 RPL13P26373 211 aaKnown RBP20.86■□□□□ 0.93
LMNA-225ENST00000515824 AP3M2P53677 418 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 NFIL3Q16649 462 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 ZNF658Q5TYW1 1059 aaPredicted RBP20.86■□□□□ 0.93
LMNA-225ENST00000515824 CEP135Q66GS9 1140 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 RNF19BQ6ZMZ0 732 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 GRASPQ7Z6J2 395 aaPredicted RBP20.86■□□□□ 0.93
LMNA-225ENST00000515824 SPATA20Q8TB22 786 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 HPDLQ96IR7 371 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 GDAP2Q9NXN4 497 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.86■□□□□ 0.93
LMNA-225ENST00000515824 SNX9Q9Y5X1 595 aa20.86■□□□□ 0.93
LMNA-225ENST00000515824 SCN1AP35498 2009 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 SEC24AO95486 1093 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 GBP2P32456 591 aaPredicted RBP20.85■□□□□ 0.93
LMNA-225ENST00000515824 UBE2HP62256 183 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 SCARA3Q6AZY7 606 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 SMYD4Q8IYR2 804 aaPredicted RBP20.85■□□□□ 0.93
LMNA-225ENST00000515824 TMEM86AQ8N2M4 240 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 PARD3BQ8TEW8 1205 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 PGLYRP2Q96PD5 576 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 LIMD1Q9UGP4 676 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 INSL5Q9Y5Q6 135 aa20.85■□□□□ 0.93
LMNA-225ENST00000515824 FSHRP23945 695 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 NR2F2P24468 414 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 CASP4P49662 377 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 TRPC3Q13507 836 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 DPH6Q7L8W6 267 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 ELMOD1Q8N336 334 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 TOP6BLQ8N6T0 577 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 OR10T2Q8NGX3 314 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 ZNF516Q92618 1163 aa20.84■□□□□ 0.93
LMNA-225ENST00000515824 ERCC4Q92889 916 aaPredicted RBP20.84■□□□□ 0.93
LMNA-225ENST00000515824 MAPK13O15264 365 aa20.83■□□□□ 0.93
LMNA-225ENST00000515824 PHACTR2O75167 634 aa20.83■□□□□ 0.93
LMNA-225ENST00000515824 CST3P01034 146 aaPredicted RBP20.83■□□□□ 0.93
LMNA-225ENST00000515824 PTPN2P17706 415 aa20.83■□□□□ 0.93
LMNA-225ENST00000515824 PRCPP42785 496 aa20.83■□□□□ 0.93
LMNA-225ENST00000515824 SMARCB1Q12824 385 aa20.83■□□□□ 0.93
LMNA-225ENST00000515824 DUSP4Q13115 394 aa20.83■□□□□ 0.93
LMNA-225ENST00000515824 ADAM9Q13443 819 aa20.83■□□□□ 0.93
LMNA-225ENST00000515824 COBLL1Q53SF7 1204 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms