RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 OR4Q2P0C623 313 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 GARTP22102 1010 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 TAF6P49848 677 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 CASP5P51878 434 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 KCNA1Q09470 495 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 SYCP3Q8IZU3 236 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 TCEAL4Q96EI5 215 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 ZNF560Q96MR9 790 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 FAM213AQ9BRX8 229 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 PANK2Q9BZ23 570 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 IKZF4Q9H2S9 585 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 CUEDC2Q9H467 287 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 TMEM206Q9H813 350 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 PANK4Q9NVE7 773 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 HSFX1Q9UBD0 423 aa18.91■□□□□ 0.62
DDX41-217ENST00000515562 MTMR11A4FU01 709 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 VNN2O95498 520 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 LDHAP00338 332 aaKnown RBP18.9■□□□□ 0.62
DDX41-217ENST00000515562 HSP90AA1P07900 732 aaKnown RBP18.9■□□□□ 0.62
DDX41-217ENST00000515562 CCR2P41597 374 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 ALDH1A3P47895 512 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 EPHB3P54753 998 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 DUSP4Q13115 394 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 SNW1Q13573 536 aaKnown RBP18.9■□□□□ 0.62
DDX41-217ENST00000515562 SV2CQ496J9 727 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 STXBP4Q6ZWJ1 553 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 METTL23Q86XA0 190 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 BRSK2Q8IWQ3 736 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 EFCAB13Q8IY85 973 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 DDX23Q9BUQ8 820 aaKnown RBP18.9■□□□□ 0.62
DDX41-217ENST00000515562 ZFP14Q9HCL3 533 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 USP34Q70CQ2 3546 aa18.9■□□□□ 0.62
DDX41-217ENST00000515562 KANSL1LA0AUZ9 987 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 MYL4P12829 197 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 FCARP24071 287 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 PNPLA4P41247 253 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 SLC44A4Q53GD3 710 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 FAM78AQ5JUQ0 283 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 CENPPQ6IPU0 288 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 HS6ST3Q8IZP7 471 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 DNASE1L2Q92874 299 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 SMARCD2Q92925 531 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 SAAL1Q96ER3 474 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 ASB16Q96NS5 453 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 PYM1Q9BRP8 204 aaKnown RBP18.89■□□□□ 0.61
DDX41-217ENST00000515562 FOXQ1Q9C009 403 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 GPR88Q9GZN0 384 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 CRISPLD1Q9H336 500 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 RBAKQ9NYW8 714 aaPredicted RBP18.89■□□□□ 0.61
DDX41-217ENST00000515562 DLGAP2Q9P1A6 1054 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 ASB3Q9Y575 518 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 TCHHQ07283 1943 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 MIA3Q5JRA6 1907 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 SCN1AP35498 2009 aa18.89■□□□□ 0.61
DDX41-217ENST00000515562 MYO15AQ9UKN7 3530 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 CYB561D2O14569 222 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 KIAA0391O15091 583 aaKnown RBP18.88■□□□□ 0.61
DDX41-217ENST00000515562 CUTAO60888 179 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 DCNP07585 359 aaKnown RBP18.88■□□□□ 0.61
DDX41-217ENST00000515562 AMPD3Q01432 767 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 SMARCB1Q12824 385 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 E2F4Q16254 413 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 TANGO2Q6ICL3 276 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 THEM5Q8N1Q8 247 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 OR10T2Q8NGX3 314 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 FGFBP2Q9BYJ0 223 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 OSBPL6Q9BZF3 934 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 KBTBD4Q9NVX7 518 aa18.88■□□□□ 0.61
DDX41-217ENST00000515562 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
DDX41-217ENST00000515562 KPNA7A9QM74 516 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 EXTL3O43909 919 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 MOSPD3O75425 235 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 FGF19O95750 216 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 TFAMQ00059 246 aaKnown RBP18.87■□□□□ 0.61
DDX41-217ENST00000515562 SLC39A12Q504Y0 691 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 POTEHQ6S545 545 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 FRMD5Q7Z6J6 570 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 ITIH5Q86UX2 942 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 TMC8Q8IU68 726 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 IQUBQ8NA54 791 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 ATAD1Q8NBU5 361 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 SHKBP1Q8TBC3 707 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 KCNG4Q8TDN1 519 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 C2orf15Q8WU43 125 aaKnown RBP18.87■□□□□ 0.61
DDX41-217ENST00000515562 CACTINQ8WUQ7 758 aaKnown RBP18.87■□□□□ 0.61
DDX41-217ENST00000515562 DEPDC1BQ8WUY9 529 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 NKD2Q969F2 451 aaPredicted RBP18.87■□□□□ 0.61
DDX41-217ENST00000515562 PSMG2Q969U7 264 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 TMEM209Q96SK2 561 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 CBWD1Q9BRT8 395 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 PLA2G2FQ9BZM2 168 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 TRIM9Q9C026 710 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 ZCWPW1Q9H0M4 648 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 DNAJC25Q9H1X3 360 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 SLITRK6Q9H5Y7 841 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 MAGEF1Q9HAY2 307 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 TRPV4Q9HBA0 871 aa18.87■□□□□ 0.61
DDX41-217ENST00000515562 PRR23AA6NEV1 266 aa18.86■□□□□ 0.61
DDX41-217ENST00000515562 ZSCAN22P10073 491 aaPredicted RBP18.86■□□□□ 0.61
DDX41-217ENST00000515562 MAGEA9P43362 315 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms