RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	MTHFD1L	Q6UB35	978 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	CELF4	Q9BZC1	486 aa	Known RBP	11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	KIF9	Q9HAQ2	790 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	GPR25	O00155	361 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	ACKR2	O00590	384 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	SART1	O43290	800 aa	Known RBP	11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	GJB6	O95452	261 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	FAM153B	P0C7A2	387 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	SLC26A2	P50443	739 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	LACTB	P83111	547 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	CLEC16A	Q2KHT3	1053 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	FAM153C	Q494X1	144 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	MARCH8	Q5T0T0	291 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	RNF187	Q5TA31	235 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	ACTRT1	Q8TDG2	376 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	USP6NL	Q92738	828 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	ITFG2	Q969R8	447 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	RNPC3	Q96LT9	517 aa	Known RBP	11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	PAIP2	Q9BPZ3	127 aa	Known RBP	11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	CDT1	Q9H211	546 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	FZD8	Q9H461	694 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	RNF186	Q9NXI6	227 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	FAM153A	Q9UHL3	310 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	MCM8	Q9UJA3	840 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	TMEM59L	Q9UK28	342 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	CPSF3	Q9UKF6	684 aa	Known RBP	11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	GNE	Q9Y223	722 aa	Known RBP	11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	PCDHB2	Q9Y5E7	798 aa		11.21	□□□□□ -0.61
CDK18-222	ENST00000515494	KIAA0391	O15091	583 aa	Known RBP	11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	KRT19	P08727	400 aa		11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	RRM1	P23921	792 aa		11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	GUCY2F	P51841	1108 aa		11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	MCL1	Q07820	350 aa		11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	GNAS	Q5JWF2	1037 aa		11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	MPZL3	Q6UWV2	235 aa		11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	CXCL17	Q6UXB2	119 aa		11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	SH3GL3	Q99963	347 aa		11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	TRIP12	Q14669	1992 aa	Predicted RBP	11.21	□□□□□ -0.62
CDK18-222	ENST00000515494	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	3e-9	■■■□□ 16.1
CDK18-222	ENST00000515494	SMIM10L2A	P0DMW4	78 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	SMIM10L2B	P0DMW5	78 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	GNA15	P30679	374 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	FCGRT	P55899	365 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	E2F5	Q15329	346 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	FAM47C	Q5HY64	1035 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	ZNF484	Q5JVG2	852 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	CEP85L	Q5SZL2	805 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	ACAD10	Q6JQN1	1059 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	AEN	Q8WTP8	325 aa	Known RBP	11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	CASKIN2	Q8WXE0	1202 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	C11orf70	Q9BRQ4	267 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	PTPRH	Q9HD43	1115 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	ERVK-5	Q9HDB9	667 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	NXF1	Q9UBU9	619 aa	Known RBP	11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	THAP12	O43422	761 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	SPOP	O43791	374 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	HOXC6	P09630	235 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	MCM3	P25205	808 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	TNNC1	P63316	161 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	ORC1	Q13415	861 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	TFDP1	Q14186	410 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	RUFY4	Q6ZNE9	571 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	TSHZ1	Q6ZSZ6	1077 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	DNAJB3	Q8WWF6	145 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	IMPG2	Q9BZV3	1241 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	TRIM31	Q9BZY9	425 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	HPCAL4	Q9UM19	191 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	ATP8B3	O60423	1300 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	EME2	A4GXA9	379 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	TREH	O43280	583 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	GAS2	O43903	313 aa	Known RBP	11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	TMEM191B	P0C7N4	346 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	UNG	P13051	313 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	NOG	Q13253	232 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	CRYM	Q14894	314 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	ENOSF1	Q7L5Y1	443 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	KIAA0319L	Q8IZA0	1049 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	CD99L2	Q8TCZ2	262 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	OSMR	Q99650	979 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	C2orf40	Q9H1Z8	148 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	ANAPC7	Q9UJX3	599 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	GTF3C4	Q9UKN8	822 aa		11.2	□□□□□ -0.62
CDK18-222	ENST00000515494	ENO4	A6NNW6	628 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	NFIC	P08651	508 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	TMOD1	P28289	359 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	RAP1GAP	P47736	663 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	MFSD10	Q14728	455 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	RBBP5	Q15291	538 aa	Known RBP	11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	DUOXA2	Q1HG44	320 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	WDR49	Q8IV35	697 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	TSEN2	Q8NCE0	465 aa	Known RBP	11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	KCNN1	Q92952	543 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	POLI	Q9UNA4	740 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	TCRBV7S2A1N4T	A0A589	114 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494		A6NJR5	290 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	MEFV	O15553	781 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	TTI1	O43156	1089 aa		11.19	□□□□□ -0.62
CDK18-222	ENST00000515494	ASS1	P00966	412 aa	Known RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms