RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 SNX31Q8N9S9 440 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 SLC26A7Q8TE54 656 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 TSSK1BQ9BXA7 367 aa15.12■□□□□ 0.01
TRIO-222ENST00000515144 DDX47Q9H0S4 455 aaKnown RBP15.12■□□□□ 0.01
TRIO-222ENST00000515144 AGLP35573 1532 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 ESYT3A0FGR9 886 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 H7C4K7 107 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 TSPAN3O60637 253 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 PCDH8O95206 1070 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 EPHB3P54753 998 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 EFEMP1Q12805 493 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 NR1H3Q13133 447 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 PURBQ96QR8 312 aaKnown RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 OSBPL9Q96SU4 736 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 TRAIPQ9BWF2 469 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 A6NNZ2 444 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 LZTS3O60299 673 aaPredicted RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 TUBB8Q3ZCM7 444 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CINPQ9BW66 212 aaPredicted RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 DISP2A7MBM2 1401 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 SCAMP3O14828 347 aaKnown RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 SUPT20HL2P0C7V6 817 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 MYBL1P10243 752 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 ORC2Q13416 577 aaPredicted RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 FAM47EQ6ZV65 393 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 GUF1Q8N442 669 aaKnown RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 TRPM4Q8TD43 1214 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 SUFUQ9UMX1 484 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 MST1RQ04912 1400 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 PXDNQ92626 1479 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 ACVR2BQ13705 512 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CXorf38Q8TB03 319 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 VCX3AQ9NNX9 186 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 DDIT4Q9NX09 232 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 MAFGO15525 162 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 PMPCBO75439 489 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CLNS1AP54105 237 aaKnown RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 ZNF177Q13360 481 aaPredicted RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 NCAPHQ15003 741 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CCDC38Q502W7 563 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CXCL17Q6UXB2 119 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 TTC39CQ8N584 583 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 MRPS31Q92665 395 aaKnown RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 DNAJC7Q99615 494 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CATSPERBQ9H7T0 1116 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 KIF17Q9P2E2 1029 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 XPO7Q9UIA9 1087 aaKnown RBP15.11■□□□□ 0.01
TRIO-222ENST00000515144 RGPD2P0DJD1 1756 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 E2F6O75461 281 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 NNTQ13423 1086 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CCDC197Q8NCU1 140 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CCDC138Q96M89 665 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CHP1Q99653 195 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 EHD2Q9NZN4 543 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 CNTNAP2Q9UHC6 1331 aa15.11■□□□□ 0.01
TRIO-222ENST00000515144 MFSD10Q14728 455 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 SCUBE2Q9NQ36 999 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 AGPAT5Q9NUQ2 364 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 SMPD4Q9NXE4 827 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 TAP1Q03518 808 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 LAMTOR4Q0VGL1 99 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 SPDYE5A6NIY4 337 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 A8MX80 341 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 GRIN1Q05586 938 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 SPDYE7PQ495Y7 208 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 FRMD3A2A2Y4 597 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 ADCY3O60266 1144 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 KRT37O76014 449 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 TYK2P29597 1187 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 SPIRE2Q8WWL2 714 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 AGO4Q9HCK5 861 aaKnown RBP15.1■□□□□ 0.01
TRIO-222ENST00000515144 RPSAP08865 295 aaKnown RBP15.1■□□□□ 0.01
TRIO-222ENST00000515144 CDKL3Q8IVW4 592 aaPredicted RBP15.1■□□□□ 0.01
TRIO-222ENST00000515144 CENPKQ9BS16 269 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 PPARGC1AQ9UBK2 798 aaKnown RBP15.1■□□□□ 0.01
TRIO-222ENST00000515144 CCDC88AQ3V6T2 1871 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 SLC9A1P19634 815 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 METTL16Q86W50 562 aaKnown RBP15.1■□□□□ 0.01
TRIO-222ENST00000515144 OSGEPL1Q9H4B0 414 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 SLC30A1Q9Y6M5 507 aa15.1■□□□□ 0.01
TRIO-222ENST00000515144 C3orf70A6NLC5 250 aaPredicted RBP15.09■□□□□ 0.01
TRIO-222ENST00000515144 MTF1Q14872 753 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 NUGGCQ68CJ6 796 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 PDCD7Q8N8D1 485 aaKnown RBP15.09■□□□□ 0.01
TRIO-222ENST00000515144 RPRD1AQ96P16 312 aaPredicted RBP15.09■□□□□ 0.01
TRIO-222ENST00000515144 TRIM10Q9UDY6 481 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 POLD3Q15054 466 aaPredicted RBP15.09■□□□□ 0.01
TRIO-222ENST00000515144 SPATA18Q8TC71 538 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 CERS4Q9HA82 394 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 PDXKO00764 312 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 INSRRP14616 1297 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 HMOX2P30519 316 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 RFX3P48380 749 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 RCAN1P53805 252 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 SP3Q02447 781 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRIO-222ENST00000515144 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRIO-222ENST00000515144 UBR1Q8IWV7 1749 aa15.09■□□□□ 0.01
TRIO-222ENST00000515144 DEPDC5O75140 1603 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms