RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 ZBTB42B2RXF5 422 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 ABLIM1O14639 778 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 RASGRF2O14827 1237 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 MED7O43513 233 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 CST3P01034 146 aaPredicted RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 RALAP11233 206 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 POLR2BP30876 1174 aaKnown RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 PTPN7P35236 360 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 TNFSF9P41273 254 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 MMP13P45452 471 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 MYL6P60660 151 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 DRP2Q13474 957 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 SKIDA1Q1XH10 827 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 ATF7IP2Q5U623 682 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 DNAJC24Q6P3W2 148 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 DRICH1Q6PGQ1 229 aaPredicted RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 SHCBP1Q8NEM2 672 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 GTF3C2Q8WUA4 911 aaPredicted RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 CNKSR2Q8WXI2 1034 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 SPATA33Q96N06 139 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 SERPINB12Q96P63 405 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 MTMR12Q9C0I1 747 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 PPANQ9NQ55 473 aaKnown RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 CHST7Q9NS84 486 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 DDX56Q9NY93 547 aaKnown RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 ASB14A6NK59 587 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 MEFVO15553 781 aaPredicted RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 TJP3O95049 919 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 ARIH2O95376 493 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 CFHP08603 1231 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 IVDP26440 423 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 ADCY8P40145 1251 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 TAS2R40P59535 323 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 SLC20A2Q08357 652 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 TTLL4Q14679 1199 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 KYAT1Q16773 422 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 ZNF699Q32M78 642 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 HSDL1Q3SXM5 330 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 ZNF568Q3ZCX4 644 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 TNFAIP8L3Q5GJ75 292 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 ZNF484Q5JVG2 852 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 CCDC62Q6P9F0 684 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 EEPD1Q7L9B9 569 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 RELL1Q8IUW5 271 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 NIPA2Q8N8Q9 360 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 RAPGEF5Q92565 580 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 CCDC114Q96M63 670 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 PTPRHQ9HD43 1115 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 PRMT7Q9NVM4 692 aaPredicted RBP15.75■□□□□ 0.11
NUP54-217ENST00000514987 TNFSF13BQ9Y275 285 aa15.75■□□□□ 0.11
NUP54-217ENST00000514987 SBF1O95248 1867 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 TLDC2A0PJX2 215 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 C5orf60A6NFR6 353 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 HOXC6P09630 235 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 MARK3P27448 753 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 SEC24CP53992 1094 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 TFAMQ00059 246 aaKnown RBP15.74■□□□□ 0.11
NUP54-217ENST00000514987 TNFAIP2Q03169 654 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 NFX1Q12986 1120 aaKnown RBP15.74■□□□□ 0.11
NUP54-217ENST00000514987 TMEM132AQ24JP5 1023 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 SEZ6Q53EL9 994 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 ERMARDQ5T6L9 678 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 PHLDB2Q86SQ0 1253 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 CCDC25Q86WR0 208 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 ERICH1Q86X53 443 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 RHPN2Q8IUC4 686 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 OTUD6BQ8N6M0 293 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 FAM212AQ96EL1 285 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 FGD4Q96M96 766 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 XPO6Q96QU8 1125 aaKnown RBP15.74■□□□□ 0.11
NUP54-217ENST00000514987 LHX5Q9H2C1 402 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 RABEP2Q9H5N1 569 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 FAM124BQ9H5Z6 455 aaPredicted RBP15.74■□□□□ 0.11
NUP54-217ENST00000514987 RBPJLQ9UBG7 517 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 USTQ9Y2C2 406 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 NEU2Q9Y3R4 380 aa15.74■□□□□ 0.11
NUP54-217ENST00000514987 TCRBV5S1A1TA0A578 114 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 TTLL13PA6NNM8 815 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 TRIM66O15016 1216 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 TCEA3O75764 348 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 DDNO94850 711 aaPredicted RBP15.73■□□□□ 0.11
NUP54-217ENST00000514987 TTC4O95801 387 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 CPP00450 1065 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 FGFR4P22455 802 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 TMOD1P28289 359 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 PHKA2P46019 1235 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 ITGA8P53708 1063 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 FAM187BQ17R55 369 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 DCUN1D2Q6PH85 259 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 TADA2BQ86TJ2 420 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 LRRC71Q8N4P6 559 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 IPO4Q8TEX9 1081 aaKnown RBP15.73■□□□□ 0.11
NUP54-217ENST00000514987 ATG4AQ8WYN0 398 aa15.73■□□□□ 0.11
NUP54-217ENST00000514987 FRMD8P1Q9BZ68 369 aaPredicted RBP15.73■□□□□ 0.11
NUP54-217ENST00000514987 CDC42EP4Q9H3Q1 356 aaKnown RBP15.73■□□□□ 0.11
NUP54-217ENST00000514987 RPF1Q9H9Y2 349 aaKnown RBP15.73■□□□□ 0.11
NUP54-217ENST00000514987 ERAP1Q9NZ08 941 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms