RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CALM1P0DP23 149 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 CALM2P0DP24 149 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 CALM3P0DP25 149 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 ARSAP15289 507 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 MX1P20591 662 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 DRD1P21728 446 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 MAOBP27338 520 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 P2RY2P41231 377 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 BRCC3P46736 316 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 ZNF33AQ06730 810 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 SLC14A1Q13336 389 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 PTPAQ15257 358 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 IMMTQ16891 758 aaKnown RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 PREPLQ4J6C6 727 aaPredicted RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 GLRA4Q5JXX5 417 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 PLA2G4FQ68DD2 849 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 NOTUMQ6P988 496 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 SPACA3Q8IXA5 215 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 RHBDD1Q8TEB9 315 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 PRPF31Q8WWY3 499 aaKnown RBP3.61□□□□□ -1.83
CHD1-211ENST00000514344 TMEM143Q96AN5 459 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 NXPE2Q96DL1 559 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 LGMNQ99538 433 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD1-211ENST00000514344 FAM117AQ9C073 453 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 CSRNP2Q9H175 543 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 IL21RQ9HBE5 538 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 HPS4Q9NQG7 708 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 GIT1Q9Y2X7 761 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 NF1P21359 2839 aa3.61□□□□□ -1.83
CHD1-211ENST00000514344 MYO16Q9Y6X6 1858 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 TSPAN1O60635 241 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 NPTXRO95502 500 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 HNRNPLP14866 589 aaKnown RBP eCLIP3.6□□□□□ -1.83
CHD1-211ENST00000514344 FGFR3P22607 806 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 ELAVL2Q12926 359 aaKnown RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 LAPTM4AQ15012 233 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 TARBP2Q15633 366 aaKnown RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 CRY1Q16526 586 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 FBXO43Q4G163 708 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 PRR16Q569H4 304 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 C6orf118Q5T5N4 469 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 GPR158Q5T848 1215 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 TMEM92Q6UXU6 159 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 ANKS3Q6ZW76 656 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 CATIPQ7Z7H3 387 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 RASSF3Q86WH2 238 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 SRBD1Q8N5C6 995 aaKnown RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 CTCFLQ8NI51 663 aaPredicted RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 CEP76Q8TAP6 659 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 EVI5LQ96CN4 794 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 HSPA12BQ96MM6 686 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 PGLYRP2Q96PD5 576 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 SPZ1Q9BXG8 430 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 GPR88Q9GZN0 384 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 CNNM2Q9H8M5 875 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 GOLGA2P5Q9HBQ8 144 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 TBC1D22BQ9NU19 505 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 THG1LQ9NWX6 298 aaKnown RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 KIAA1522Q9P206 1035 aaPredicted RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 IGLV3-22A0A075B6J6 115 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 IGKV6-21A0A0C4DH24 114 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 PTGESO14684 152 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 B4GALT5O43286 388 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 AP5Z1O43299 807 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 ABLIM3O94929 683 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 THP07101 528 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 JUPP14923 745 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 CPB1P15086 417 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 ARF4P18085 180 aaPredicted RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 CLCNKBP51801 687 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 NAPAP54920 295 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 NPEPPSP55786 919 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 RIPPLY3P57055 190 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 CYP4F8P98187 520 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 PLCB2Q00722 1185 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 RHDQ02161 417 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 NCBP1Q09161 790 aaKnown RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 GRIK2Q13002 908 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 UBAP2LQ14157 1087 aaKnown RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 KIAA1614Q5VZ46 1190 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 JAKMIP3Q5VZ66 844 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 LMBRD2Q68DH5 695 aaPredicted RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 SLC8B1Q6J4K2 584 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 TYW1BQ6NUM6 668 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 ZNF574Q6ZN55 896 aaPredicted RBP3.6□□□□□ -1.83
CHD1-211ENST00000514344 GAREM2Q75VX8 874 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 RTL10Q7L3V2 364 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 GLRX5Q86SX6 157 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 TCEAL8Q8IYN2 117 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 HACE1Q8IYU2 909 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 C3orf58Q8NDZ4 430 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 WHAMMQ8TF30 809 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 SLC7A3Q8WY07 619 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 TSC1Q92574 1164 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 RILPL2Q969X0 211 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 MED8Q96G25 268 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 DDX19BQ9UMR2 479 aa3.6□□□□□ -1.83
CHD1-211ENST00000514344 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms