RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 SHMT1P34896 483 aa13.73□□□□□ -0.21
PRDM16-208ENST00000514189 TMEM8AQ9HCN3 771 aa13.73□□□□□ -0.21
PRDM16-208ENST00000514189 PIM2Q9P1W9 311 aa13.73□□□□□ -0.21
PRDM16-208ENST00000514189 EPS15L1Q9UBC2 864 aa13.73□□□□□ -0.21
PRDM16-208ENST00000514189 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
PRDM16-208ENST00000514189 ZNF263O14978 683 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 GYS1P13807 737 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 ADRA2BP18089 450 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 NR1H3Q13133 447 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 EMC2Q15006 297 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 RASSF3Q86WH2 238 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 AENQ8WTP8 325 aaKnown RBP13.72□□□□□ -0.21
PRDM16-208ENST00000514189 MTMR12Q9C0I1 747 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 NDE1Q9NXR1 346 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 KNDC1Q76NI1 1749 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 TRIM49D1C9J1S8 452 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 AIM2O14862 343 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 HUS1O60921 280 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 SLITRK3O94933 977 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 ZCCHC18P0CG32 403 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 RARAP10276 462 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 ENO3P13929 434 aaPredicted RBP13.72□□□□□ -0.21
PRDM16-208ENST00000514189 MEA1Q16626 185 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 LAYNQ6UX15 382 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 RNF139Q8WU17 664 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 HAS1Q92839 578 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 TMEM237Q96Q45 408 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 WDR70Q9NW82 654 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 BFARQ9NZS9 450 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 HEY2Q9UBP5 337 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 FAM8A1Q9UBU6 413 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 KIF3CO14782 793 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 HOXA7P31268 230 aaPredicted RBP13.72□□□□□ -0.21
PRDM16-208ENST00000514189 NSUN2Q08J23 767 aaKnown RBP eCLIP13.72□□□□□ -0.21
PRDM16-208ENST00000514189 ECM1Q16610 540 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 C11orf63Q6NUN7 778 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 LLGL2Q6P1M3 1020 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 SLC51AQ86UW1 340 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 FEZF2Q8TBJ5 459 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 CEP41Q9BYV8 373 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 UNKQ9C0B0 810 aaKnown RBP13.72□□□□□ -0.21
PRDM16-208ENST00000514189 SPC25Q9HBM1 224 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 FOXO6A8MYZ6 492 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 PPP1R13LQ8WUF5 828 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 STAMBPL1Q96FJ0 436 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 ZBTB45Q96K62 511 aaPredicted RBP13.72□□□□□ -0.21
PRDM16-208ENST00000514189 APOL2Q9BQE5 337 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 MKNK1Q9BUB5 465 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 CHST7Q9NS84 486 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 CNOT7Q9UIV1 285 aaKnown RBP13.72□□□□□ -0.21
PRDM16-208ENST00000514189 SALL4Q9UJQ4 1053 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 PHTF1Q9UMS5 762 aa13.72□□□□□ -0.21
PRDM16-208ENST00000514189 TTC4O95801 387 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 SURF1Q15526 300 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 ARMCX2Q7L311 632 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 GALNT4Q8N4A0 578 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 LRRN4Q8WUT4 740 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 FAM136AQ96C01 138 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 SLC10A4Q96EP9 437 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 TRPV6Q9H1D0 765 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 VCX3AQ9NNX9 186 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.71□□□□□ -0.216e-6■□□□□ 10.5
PRDM16-208ENST00000514189 RNF103-CHMP3A0A140T963 221 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 XPOTO43592 962 aaKnown RBP13.71□□□□□ -0.21
PRDM16-208ENST00000514189 RFX1P22670 979 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 SSTR1P30872 391 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
PRDM16-208ENST00000514189 PRAMEP78395 509 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 DRP2Q13474 957 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 BMPR2Q13873 1038 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 TKFCQ3LXA3 575 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 ATP13A4Q4VNC1 1196 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 FAM182AQ5T1J6 154 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 ENOSF1Q7L5Y1 443 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 PRCCQ92733 491 aaPredicted RBP13.71□□□□□ -0.21
PRDM16-208ENST00000514189 MMTAG2Q9BU76 263 aaKnown RBP13.71□□□□□ -0.21
PRDM16-208ENST00000514189 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
PRDM16-208ENST00000514189 PHKA2P46019 1235 aa13.71□□□□□ -0.22
PRDM16-208ENST00000514189 ZNF200P98182 395 aaPredicted RBP13.71□□□□□ -0.22
PRDM16-208ENST00000514189 EML3Q32P44 896 aa13.71□□□□□ -0.22
PRDM16-208ENST00000514189 TMC3Q7Z5M5 1100 aa13.71□□□□□ -0.22
PRDM16-208ENST00000514189 NT5DC3Q86UY8 548 aa13.71□□□□□ -0.22
PRDM16-208ENST00000514189 RCOR2Q8IZ40 523 aa13.71□□□□□ -0.22
PRDM16-208ENST00000514189 MTBPQ96DY7 904 aa13.71□□□□□ -0.22
PRDM16-208ENST00000514189 PSMC3IPQ9P2W1 217 aaPredicted RBP13.71□□□□□ -0.22
PRDM16-208ENST00000514189 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.22
PRDM16-208ENST00000514189 ANGPTL3Q9Y5C1 460 aa13.71□□□□□ -0.22
PRDM16-208ENST00000514189 PPP1R12AO14974 1030 aaPredicted RBP13.7□□□□□ -0.22
PRDM16-208ENST00000514189 ATP5HO75947 161 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 RARGP13631 454 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 FLT3P36888 993 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 ZBTB41Q5SVQ8 909 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 ACTRT1Q8TDG2 376 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 CCDC138Q96M89 665 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 SPON2Q9BUD6 331 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 AIPL1Q9NZN9 384 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 FAM237AA0A1B0GTK4 181 aa13.7□□□□□ -0.22
PRDM16-208ENST00000514189 APOEP02649 317 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms