RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 POLR2BP30876 1174 aaKnown RBP15.91■□□□□ 0.14
VCAN-211ENST00000513984 PSMC4P43686 418 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 GJA9P57773 515 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 LACTBP83111 547 aaPredicted RBP15.91■□□□□ 0.14
VCAN-211ENST00000513984 CBX1P83916 185 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 CASP8Q14790 479 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 SNX17Q15036 470 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 ZNF394Q53GI3 561 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 KLHL7Q8IXQ5 586 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 TMEM130Q8N3G9 435 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 SMC1BQ8NDV3 1235 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 TFAP2BQ92481 460 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 TRIB2Q92519 343 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 SNX27Q96L92 541 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 ARHGAP39Q9C0H5 1083 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 SDCBP2Q9H190 292 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 SLITRK6Q9H5Y7 841 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 MRPL47Q9HD33 250 aaKnown RBP15.91■□□□□ 0.14
VCAN-211ENST00000513984 DPP3Q9NY33 737 aa15.91■□□□□ 0.14
VCAN-211ENST00000513984 MYADML2A6NDP7 307 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 ITGA4P13612 1032 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 P4HA1P13674 534 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 SSTR3P32745 418 aaPredicted RBP15.9■□□□□ 0.14
VCAN-211ENST00000513984 SLC1A1P43005 524 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 RAP1GAPP47736 663 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 RBP5P82980 135 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 ZNF200P98182 395 aaPredicted RBP15.9■□□□□ 0.14
VCAN-211ENST00000513984 ZNF211Q13398 564 aaPredicted RBP15.9■□□□□ 0.14
VCAN-211ENST00000513984 C2CD6Q53TS8 623 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 MFSD14CQ5VZR4 134 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 MMS22LQ6ZRQ5 1243 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 CPNE8Q86YQ8 564 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 IFT20Q8IY31 132 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 GSPT2Q8IYD1 628 aaKnown RBP15.9■□□□□ 0.14
VCAN-211ENST00000513984 NME8Q8N427 588 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 TMEM35BQ8NCS4 154 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 TMEM40Q8WWA1 233 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 KIF12Q96FN5 646 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 HPDLQ96IR7 371 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 EIF2AQ9BY44 585 aaKnown RBP15.9■□□□□ 0.14
VCAN-211ENST00000513984 UPF3AQ9H1J1 476 aaKnown RBP15.9■□□□□ 0.14
VCAN-211ENST00000513984 SMYD3Q9H7B4 428 aa15.9■□□□□ 0.14
VCAN-211ENST00000513984 BHMG1C9JSJ3 638 aaPredicted RBP15.89■□□□□ 0.13
VCAN-211ENST00000513984 MYO1FO00160 1098 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 SART1O43290 800 aaKnown RBP15.89■□□□□ 0.13
VCAN-211ENST00000513984 CILPO75339 1184 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 CALB1P05937 261 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 C6orf222P0C671 652 aaPredicted RBP15.89■□□□□ 0.13
VCAN-211ENST00000513984 HSPA6P17066 643 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 RAD23BP54727 409 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 MAMLD1Q13495 774 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 PPP2R5EQ16537 467 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 LLGL2Q6P1M3 1020 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 C7orf31Q8N865 590 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 WHAMMQ8TF30 809 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 TRIM7Q9C029 511 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 DDX47Q9H0S4 455 aaKnown RBP15.89■□□□□ 0.13
VCAN-211ENST00000513984 VIPAS39Q9H9C1 493 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 SNTG2Q9NY99 539 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 GABRQQ9UN88 632 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 AGAP1Q9UPQ3 857 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 MED7O43513 233 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 PROSCO94903 275 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 GUCY2FP51841 1108 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 CRYBB1P53674 252 aaPredicted RBP15.89■□□□□ 0.13
VCAN-211ENST00000513984 EPHB4P54760 987 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 CDH8P55286 799 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 NKX3-2P78367 333 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 SEL1L2Q5TEA6 688 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 C1orf131Q8NDD1 294 aaKnown RBP15.89■□□□□ 0.13
VCAN-211ENST00000513984 MTG1Q9BT17 334 aaPredicted RBP15.89■□□□□ 0.13
VCAN-211ENST00000513984 LHX5Q9H2C1 402 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 PARVAQ9NVD7 372 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 CNTN3Q9P232 1028 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 CEP83Q9Y592 693 aa15.89■□□□□ 0.13
VCAN-211ENST00000513984 GOLGA6L10A0A0M3HER8 536 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 TCRBV5S1A1TA0A578 114 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 KIF3CO14782 793 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 FLT3LGP49771 235 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 YARSP54577 528 aaKnown RBP15.88■□□□□ 0.13
VCAN-211ENST00000513984 RWDD2BP57060 319 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 GUCY2DQ02846 1103 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 INCA1Q0VD86 236 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 ZBTB6Q15916 424 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 TAF2Q6P1X5 1199 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 EMBQ6PCB8 327 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 ALKAL1Q6UXT8 129 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 TTC39CQ8N584 583 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 WDTC1Q8N5D0 677 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 EIF1ADQ8N9N8 165 aaKnown RBP15.88■□□□□ 0.13
VCAN-211ENST00000513984 SLC4A11Q8NBS3 891 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 EPB41L5Q9HCM4 733 aa15.88■□□□□ 0.13
VCAN-211ENST00000513984 ZSCAN5CA6NGD5 496 aaPredicted RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 MAN1A1P33908 653 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 PTPN11Q06124 597 aaPredicted RBP15.87■□□□□ 0.13
VCAN-211ENST00000513984 CYP4F22Q6NT55 531 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 AADACL2Q6P093 401 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 PHLDB2Q86SQ0 1253 aa15.87■□□□□ 0.13
VCAN-211ENST00000513984 CCDC26Q8TAB7 109 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms