RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 PI4K2BG5E9Z4 385 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 RTN3O95197 1032 aaPredicted RBP10.19□□□□□ -0.78
VCAN-210ENST00000513960 CETPP11597 493 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 GM2AP17900 193 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 EIF2AK2P19525 551 aaKnown RBP10.19□□□□□ -0.78
VCAN-210ENST00000513960 PPATQ06203 517 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 P3H1Q32P28 736 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 TKFCQ3LXA3 575 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 DAW1Q8N136 415 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 SLC25A41Q8N5S1 370 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 SEC14L1Q92503 715 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 GORASP1Q9BQQ3 440 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 MOV10L1Q9BXT6 1211 aaKnown RBP10.19□□□□□ -0.78
VCAN-210ENST00000513960 VCX3BQ9H321 246 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 RAVER2Q9HCJ3 691 aaKnown RBP10.19□□□□□ -0.78
VCAN-210ENST00000513960 VCX3AQ9NNX9 186 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 TBC1D22BQ9NU19 505 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 ATAD5Q96QE3 1844 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 ATP2A1O14983 1001 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 LMNAP02545 664 aaKnown RBP10.19□□□□□ -0.78
VCAN-210ENST00000513960 KITP10721 976 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 CD58P19256 250 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 ITIH2P19823 946 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 PTGER2P43116 358 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 RARRES1P49788 294 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 B3GNT9Q6UX72 402 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 HAUS6Q7Z4H7 955 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 ZDHHC14Q8IZN3 488 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 ASAP3Q8TDY4 903 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 GMLQ99445 158 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 EPAS1Q99814 870 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 LRMDAQ9H2I8 198 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 ARMCX1Q9P291 453 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 NENFQ9UMX5 172 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 LRCH1Q9Y2L9 728 aa10.19□□□□□ -0.78
VCAN-210ENST00000513960 MAPTP10636 758 aaKnown RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 YWHABP31946 246 aaKnown RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 RPA3P35244 121 aaPredicted RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 PGM1P36871 562 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 MAGEA4P43358 317 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 ARFIP2P53365 341 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 PEX3P56589 373 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 KDSRQ06136 332 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 XKR9Q5GH70 373 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 LRRC74BQ6ZQY2 392 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 NIPA1Q7RTP0 329 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.18□□□□□ -0.78
VCAN-210ENST00000513960 IL31RAQ8NI17 732 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 CFAP57Q96MR6 1250 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 RILPQ96NA2 401 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 CBWD1Q9BRT8 395 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 CCDC134Q9H6E4 229 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 HSPBP1Q9NZL4 362 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 COL20A1Q9P218 1284 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 C2orf71A6NGG8 1288 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 TISP43B9A030 160 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 WDR46O15213 610 aaKnown RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 ENO1P06733 434 aaKnown RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 PTPN4P29074 926 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 GSTT1P30711 240 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 MXI1P50539 228 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 DRG2P55039 364 aaKnown RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 WDR4P57081 412 aaKnown RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 DLG4P78352 724 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 SYCP2LQ5T4T6 812 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 FAM102BQ5T8I3 360 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 CGB2Q6NT52 195 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 ARHGEF19Q8IW93 802 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 GALNT15Q8N3T1 639 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 TRAIPQ9BWF2 469 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 SMYD3Q9H7B4 428 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 AGO4Q9HCK5 861 aaKnown RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 PCYOX1Q9UHG3 505 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 ZNRF3Q9ULT6 936 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 EXOC7Q9UPT5 735 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 SLC16A4O15374 487 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 P4HA2O15460 535 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 NOP14P78316 857 aaKnown RBP10.18□□□□□ -0.78
VCAN-210ENST00000513960 PCNX4Q63HM2 1172 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 IRGCQ6NXR0 463 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 ASRGL1Q7L266 308 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 AGBL3Q8NEM8 1001 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 LPAR1Q92633 364 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 TRIM55Q9BYV6 548 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 NCANO14594 1321 aa10.18□□□□□ -0.78
VCAN-210ENST00000513960 TESPA1A2RU30 521 aaPredicted RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 H3BRJ5 948 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 CCDC22O60826 627 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 DYNLT1P63172 113 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 STAT4Q14765 748 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 KIF22Q14807 665 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 OLFML2BQ68BL8 750 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 MFSD5Q6N075 450 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 IZUMO2Q6UXV1 221 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 PASD1Q8IV76 773 aa10.17□□□□□ -0.78
VCAN-210ENST00000513960 FBXO6Q9NRD1 293 aaPredicted RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 PPARGC1AQ9UBK2 798 aaKnown RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 MARCOQ9UEW3 520 aaPredicted RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 SCAF8Q9UPN6 1271 aaKnown RBP10.17□□□□□ -0.78
VCAN-210ENST00000513960 CCDC195A0A1B0GUA6 201 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms