RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 STK32AQ8WU08 396 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 TMA16Q96EY4 203 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 RIOX1Q9H6W3 641 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 CHST7Q9NS84 486 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SNRPAP09012 282 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 BGNP21810 368 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 GPC3P51654 580 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 PPP4CP60510 307 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 AP1B1Q10567 949 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 FUT2Q10981 343 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 NCOA4Q13772 614 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 KPNB1Q14974 876 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SURF1Q15526 300 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 CBWD6Q4V339 395 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 CBWD3Q5JTY5 395 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 KCNT1Q5JUK3 1230 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 CBWD5Q5RIA9 395 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 PPIL6Q8IXY8 311 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 RNF169Q8NCN4 708 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 NEUROG2Q9H2A3 272 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 UNC45AQ9H3U1 944 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 ACP6Q9NPH0 428 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 WARS2Q9UGM6 360 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 P4HA2O15460 535 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SLC26A4O43511 780 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SH3BP5O60239 455 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 POU5F1BQ06416 359 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 PKN2Q16513 984 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 MAPK6Q16659 721 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 C11orf63Q6NUN7 778 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 INTS5Q6P9B9 1019 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 ZNF720Q7Z2F6 126 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 EIF1ADQ8N9N8 165 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SCFD2Q8WU76 684 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 CENPTQ96BT3 561 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 DTNBP1Q96EV8 351 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 PAFAH2Q99487 392 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 GANQ9H2C0 597 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 DNAJC18Q9H819 358 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 ZNF277Q9NRM2 450 aaPredicted RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 FEM1BQ9UK73 627 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 A8MUI8 341 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 KIAA0391O15091 583 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SLC4A1P02730 911 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 HSPA8P11142 646 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SFNP31947 248 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 GTF2H1P32780 548 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 RASA2Q15283 850 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 HABP4Q5JVS0 413 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SCUBE1Q8IWY4 988 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 NLGN1Q8N2Q7 840 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 TNFRSF25Q93038 417 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 NMD3Q96D46 503 aaKnown RBP8.14□□□□□ -1.11
CLCN3-209ENST00000513761 HAUS8Q9BT25 410 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 OSBPL7Q9BZF2 842 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 SNX25Q9H3E2 840 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 LRRC4Q9HBW1 653 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 ARMCX1Q9P291 453 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 PCDHA10Q9Y5I2 948 aa8.14□□□□□ -1.11
CLCN3-209ENST00000513761 ANKRD26Q9UPS8 1709 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 DLG5Q8TDM6 1919 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 CCDC78A2IDD5 438 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 CALB2P22676 271 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 MORF4L2Q15014 288 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 TAS1R2Q8TE23 839 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 SCG3Q8WXD2 468 aaKnown RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 CLMNQ96JQ2 1002 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 PWWP2AQ96N64 755 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 MTMR9Q96QG7 549 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 CCDC68Q9H2F9 335 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 KCND2Q9NZV8 630 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 FNDC3AQ9Y2H6 1198 aaKnown RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 RIC1Q4ADV7 1423 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 XPO1O14980 1071 aaKnown RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 ZBTB39O15060 712 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 ASNSP08243 561 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 SRGAP2BP0DMP2 458 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 BRD2P25440 801 aaKnown RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 LINC00116Q8NCU8 138 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 PPCSQ9HAB8 311 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 GTPBP10A4D1E9 387 aaKnown RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 APOL1O14791 398 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 GZMAP12544 262 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 PIGHQ14442 188 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 WDR72Q3MJ13 1102 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 GPAT2Q6NUI2 795 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 RNF135Q8IUD6 432 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 LNX1Q8TBB1 728 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 CNBD2Q96M20 576 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 RNPEPL1Q9HAU8 725 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 SRRM3A6NNA2 597 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 ATP9BO43861 1147 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 TLR2O60603 784 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 ENTPD5O75356 428 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 TAP1Q03518 808 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 RRP1BQ14684 758 aaKnown RBP8.13□□□□□ -1.11
CLCN3-209ENST00000513761 DUOXA2Q1HG44 320 aa8.13□□□□□ -1.11
CLCN3-209ENST00000513761 THEMIS2Q5TEJ8 643 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms