RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 FAM173BQ6P4H8 233 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 SLC39A4Q6P5W5 647 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 RNF19BQ6ZMZ0 732 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 ITIH5Q86UX2 942 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 SFR1Q86XK3 245 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 NPAS3Q8IXF0 933 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 CCDC105Q8IYK2 499 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 EFCAB3Q8N7B9 438 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 LINC00301Q8NCQ3 95 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 LRRC15Q8TF66 581 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 C2orf15Q8WU43 125 aaKnown RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 SMARCD2Q92925 531 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 DNAJC19Q96DA6 116 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 SENP8Q96LD8 212 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 USP28Q96RU2 1077 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 RPP25Q9BUL9 199 aaKnown RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 STRA6Q9BX79 667 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 MFRPQ9BY79 579 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 OSBPL6Q9BZF3 934 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 TBC1D17Q9HA65 648 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 ASAH2Q9NR71 780 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 PANK4Q9NVE7 773 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 HCFC1R1Q9NWW0 138 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 TFIP11Q9UBB9 837 aaKnown RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 CFAP45Q9UL16 551 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 CA14Q9ULX7 337 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 MRPS17Q9Y2R5 130 aaKnown RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 TIMM13Q9Y5L4 95 aaPredicted RBP7.9□□□□□ -1.14
HTT-212ENST00000513639 INSL5Q9Y5Q6 135 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 DMDP11532 3685 aa7.9□□□□□ -1.14
HTT-212ENST00000513639 MTCL1Q9Y4B5 1905 aaKnown RBP7.9□□□□□ -1.15
HTT-212ENST00000513639 VPS13AQ96RL7 3174 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 FAM186AA6NE01 2351 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 KANSL1LA0AUZ9 987 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 FRMD3A2A2Y4 597 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 KPNA7A9QM74 516 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 TULP1O00294 542 aaPredicted RBP7.89□□□□□ -1.15
HTT-212ENST00000513639 MAN2B1O00754 1011 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 CUTAO60888 179 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 PPP1R37O75864 691 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 GCNT3O95395 438 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 YEATS4O95619 227 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 CYP11A1P05108 521 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 GLULP15104 373 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 ADSSP30520 456 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 NBL1P41271 181 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 MAGEA9P43362 315 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 TAF6P49848 677 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 DUSP4Q13115 394 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 SNW1Q13573 536 aaKnown RBP7.89□□□□□ -1.15
HTT-212ENST00000513639 SURF1Q15526 300 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 TAF12Q16514 161 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 ZBTB41Q5SVQ8 909 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 CENPPQ6IPU0 288 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 ZNF852Q6ZMS4 543 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 HSCBQ8IWL3 235 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 DCP1BQ8IZD4 617 aaKnown RBP7.89□□□□□ -1.15
HTT-212ENST00000513639 KCNG4Q8TDN1 519 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 IRF7Q92985 503 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 PYM1Q9BRP8 204 aaKnown RBP7.89□□□□□ -1.15
HTT-212ENST00000513639 FAM213AQ9BRX8 229 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 TRMT61BQ9BVS5 477 aaKnown RBP7.89□□□□□ -1.15
HTT-212ENST00000513639 BCO2Q9BYV7 579 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 TNMDQ9H2S6 317 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 KIAA1586Q9HCI6 787 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 WDR70Q9NW82 654 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 TBC1D7Q9P0N9 293 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 CEP72Q9P209 647 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 ZMYM5Q9UJ78 669 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 MYO15AQ9UKN7 3530 aa7.89□□□□□ -1.15
HTT-212ENST00000513639 CFAP54Q96N23 3096 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 ZNF233A6NK53 670 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 FAM170BA6NMN3 283 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 EXTL3O43909 919 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 GFRA3O60609 400 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 NFICP08651 508 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 MYL4P12829 197 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 PSMC3P17980 439 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 EPHA5P54756 1037 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 MLLT6P55198 1093 aaPredicted RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 SNRPFP62306 86 aaKnown RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 RBP5P82980 135 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 TFAMQ00059 246 aaKnown RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 VEPH1Q14D04 833 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 ANGPT1Q15389 498 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 MLF2Q15773 248 aaPredicted RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 SLC5A9Q2M3M2 681 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 SV2CQ496J9 727 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 FAM78AQ5JUQ0 283 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 PRSS36Q5K4E3 855 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 CWF19L1Q69YN2 538 aaKnown RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 TANGO2Q6ICL3 276 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 CNNM4Q6P4Q7 775 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 C1orf228Q6PIY5 440 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 CRELD2Q6UXH1 353 aaPredicted RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 DNAJB7Q7Z6W7 309 aaPredicted RBP7.88□□□□□ -1.15
HTT-212ENST00000513639 C1orf210Q8IVY1 113 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 MFSD6LQ8IWD5 586 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 CSGALNACT2Q8N6G5 542 aa7.88□□□□□ -1.15
HTT-212ENST00000513639 PDILTQ8N807 584 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms