RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 LILRA4P59901 499 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 APBA1Q02410 837 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 ELAVL2Q12926 359 aaKnown RBP11.62□□□□□ -0.55
PFDN1-204ENST00000512707 GJB7Q6PEY0 223 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 DPH6Q7L8W6 267 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 VPS36Q86VN1 386 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 METTL23Q86XA0 190 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 ZNF280BQ86YH2 543 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 COLGALT2Q8IYK4 626 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 TMEM86AQ8N2M4 240 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 TOP6BLQ8N6T0 577 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 TATDN2Q93075 761 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 RNPC3Q96LT9 517 aaKnown RBP11.62□□□□□ -0.55
PFDN1-204ENST00000512707 NAA15Q9BXJ9 866 aaKnown RBP11.62□□□□□ -0.55
PFDN1-204ENST00000512707 BCO2Q9BYV7 579 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 SNX25Q9H3E2 840 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 APOBEC3GQ9HC16 384 aaKnown RBP11.62□□□□□ -0.55
PFDN1-204ENST00000512707 DSEQ9UL01 958 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 FAN1Q9Y2M0 1017 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 PCDHB4Q9Y5E5 795 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 BZW2Q9Y6E2 419 aaKnown RBP11.62□□□□□ -0.55
PFDN1-204ENST00000512707 TTC3P53804 2025 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 TET1Q8NFU7 2136 aa11.62□□□□□ -0.55
PFDN1-204ENST00000512707 CYB561D2O14569 222 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 PPEF2O14830 753 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 TLL1O43897 1013 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 LRRN2O75325 713 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 DDHD2O94830 711 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 FAM163BP0C2L3 166 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 CD58P19256 250 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 PPM1AP35813 382 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 ASPAP45381 313 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 PSEN1P49768 467 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 EPHB4P54760 987 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 JAM2P57087 298 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 TDRD12Q587J7 1177 aaKnown RBP11.61□□□□□ -0.55
PFDN1-204ENST00000512707 CYP26C1Q6V0L0 522 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 HERC6Q8IVU3 1022 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 FIBCD1Q8N539 461 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 TC2NQ8N9U0 490 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 SPATA18Q8TC71 538 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 SHC3Q92529 594 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 BAP1Q92560 729 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 ZNF689Q96CS4 500 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-204ENST00000512707 ZNF558Q96NG5 402 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 RAD9AQ99638 391 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 BAG1Q99933 345 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-204ENST00000512707 UBE2OQ9C0C9 1292 aaKnown RBP11.61□□□□□ -0.55
PFDN1-204ENST00000512707 NRDE2Q9H7Z3 1164 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 CISHQ9NSE2 258 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 STK39Q9UEW8 545 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 POLIQ9UNA4 740 aa11.61□□□□□ -0.55
PFDN1-204ENST00000512707 PRG3Q9Y2Y8 225 aaPredicted RBP11.61□□□□□ -0.55
PFDN1-204ENST00000512707 SF3B1O75533 1304 aaKnown RBP eCLIP11.6□□□□□ -0.553e-6■■■■■ 137.9
PFDN1-204ENST00000512707 TDRD15B5MCY1 1934 aaKnown RBP11.6□□□□□ -0.55
PFDN1-204ENST00000512707 NRP1O14786 923 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 TACC1O75410 805 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 GFPT2O94808 682 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 KIF4AO95239 1232 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 IPO7O95373 1038 aaKnown RBP11.6□□□□□ -0.55
PFDN1-204ENST00000512707 SERPING1P05155 500 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 WEE2P0C1S8 567 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 HNRNPH3P31942 346 aaKnown RBP11.6□□□□□ -0.55
PFDN1-204ENST00000512707 PDE6CP51160 858 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 BCAR1P56945 870 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 ARID5AQ03989 594 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 PTK2Q05397 1052 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 KLHL30Q0D2K2 578 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 ARID5BQ14865 1188 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 LRIT3Q3SXY7 679 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 DPY19L2P1Q6NXN4 242 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 TMEM270Q6UE05 265 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 TMTC1Q8IUR5 882 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 ADGRF2Q8IZF7 708 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 SUSD3Q96L08 255 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 SENP8Q96LD8 212 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 KREMEN1Q96MU8 473 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 ARID3AQ99856 593 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 DEF6Q9H4E7 631 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 SMYD3Q9H7B4 428 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 AIPL1Q9NZN9 384 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-204ENST00000512707 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 ADAM28Q9UKQ2 775 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 BARX2Q9UMQ3 279 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-204ENST00000512707 RWDD3Q9Y3V2 267 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 PCDHB12Q9Y5F1 795 aa11.6□□□□□ -0.55
PFDN1-204ENST00000512707 RBAK-RBAKDNI3L0D1 243 aa11.59□□□□□ -0.55
PFDN1-204ENST00000512707 FOXN3O00409 490 aaPredicted RBP11.59□□□□□ -0.55
PFDN1-204ENST00000512707 SPTLC1O15269 473 aa11.59□□□□□ -0.55
PFDN1-204ENST00000512707 ANXA13P27216 316 aa11.59□□□□□ -0.55
PFDN1-204ENST00000512707 DEKP35659 375 aaKnown RBP11.59□□□□□ -0.55
PFDN1-204ENST00000512707 LHX1P48742 406 aa11.59□□□□□ -0.55
PFDN1-204ENST00000512707 SLC11A1P49279 550 aa11.59□□□□□ -0.55
PFDN1-204ENST00000512707 AARSP49588 968 aaKnown RBP eCLIP11.59□□□□□ -0.553e-6■■■■■ 61.8
PFDN1-204ENST00000512707 HTRA4P83105 476 aaPredicted RBP11.59□□□□□ -0.55
PFDN1-204ENST00000512707 CDK17Q00537 523 aa11.59□□□□□ -0.55
PFDN1-204ENST00000512707 INCA1Q0VD86 236 aa11.59□□□□□ -0.55
PFDN1-204ENST00000512707 TMCO2Q7Z6W1 182 aaPredicted RBP11.59□□□□□ -0.55
PFDN1-204ENST00000512707 UNC93AQ86WB7 457 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms