RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 RIN2Q8WYP3 895 aaPredicted RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 SMG7Q92540 1137 aaKnown RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 MYO19Q96H55 970 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 C8orf76Q96K31 380 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 IFT74Q96LB3 600 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 RTP3Q9BQQ7 232 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 LLPHQ9BRT6 129 aaKnown RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 KCNK12Q9HB15 430 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 WDR6Q9NNW5 1121 aaKnown RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP46-208ENST00000512656 MIOSQ9NXC5 875 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP46-208ENST00000512656 DUSP12Q9UNI6 340 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 LIMCH1Q9UPQ0 1083 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.92□□□□□ -1.14
USP46-208ENST00000512656 CLUHO75153 1309 aa7.92□□□□□ -1.14
USP46-208ENST00000512656 EP300Q09472 2414 aaPredicted RBP7.91□□□□□ -1.14
USP46-208ENST00000512656 PROB1E7EW31 1015 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 H0Y858 1186 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 ACKR2O00590 384 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 LARGE1O95461 756 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 PRKCBP05771 671 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 THP07101 528 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 OR52Z1P0C646 297 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 CYP11B2P19099 503 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 RFX1P22670 979 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 RPA1P27694 616 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 NAMPTP43490 491 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 TRAPPC10P48553 1259 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 RBM25P49756 843 aaKnown RBP7.91□□□□□ -1.14
USP46-208ENST00000512656 EFNA5P52803 228 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 HMGN5P82970 282 aaKnown RBP7.91□□□□□ -1.14
USP46-208ENST00000512656 TUSC3Q13454 348 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 PRPF4BQ13523 1007 aaKnown RBP7.91□□□□□ -1.14
USP46-208ENST00000512656 DCAF4L1Q3SXM0 396 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 LIN9Q5TKA1 542 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 MAEAQ7L5Y9 396 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 CDR2LQ86X02 465 aaPredicted RBP7.91□□□□□ -1.14
USP46-208ENST00000512656 PALB2Q86YC2 1186 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 TMEM105Q8N8V8 129 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 GSTCDQ8NEC7 633 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 FLCNQ8NFG4 579 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 KIFAP3Q92845 792 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 PNMA5Q96PV4 448 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 RAB34Q9BZG1 259 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 GPR62Q9BZJ7 368 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 NT5C3AQ9H0P0 336 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 TMEM60Q9H2L4 133 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 FOXP1Q9H334 677 aaPredicted RBP7.91□□□□□ -1.14
USP46-208ENST00000512656 FZD8Q9H461 694 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 GPRC5CQ9NQ84 441 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 FAM86C1Q9NVL1 165 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 KLK14Q9P0G3 267 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 EPS15L1Q9UBC2 864 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 NOL7Q9UMY1 257 aaKnown RBP7.91□□□□□ -1.14
USP46-208ENST00000512656 ZFP37Q9Y6Q3 630 aaPredicted RBP7.91□□□□□ -1.14
USP46-208ENST00000512656 VPS13AQ96RL7 3174 aa7.91□□□□□ -1.14
USP46-208ENST00000512656 PHLPP2Q6ZVD8 1323 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 A0A087WWV3 80 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 F8W810 466 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 TGM5O43548 720 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 XYLBO75191 536 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 MED24O75448 989 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 RFPL2O75678 378 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 PAPLNO95428 1278 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 HNRNPA1P09651 372 aaKnown RBP eCLIP7.9□□□□□ -1.14
USP46-208ENST00000512656 SPATA31D3P0C874 917 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 AOC1P19801 751 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 CCT6AP40227 531 aaKnown RBP7.9□□□□□ -1.14
USP46-208ENST00000512656 NBL1P41271 181 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 GUCY1B3Q02153 619 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 ZNF174Q15697 407 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 FAM171A1Q5VUB5 890 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 LILRA6Q6PI73 481 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 SPATA31D4Q6ZUB0 917 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 NOSTRINQ8IVI9 506 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 FAM184AQ8NB25 1140 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 FBXO18Q8NFZ0 1043 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 PIK3R5Q8WYR1 880 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 ZNF707Q96C28 371 aaPredicted RBP7.9□□□□□ -1.14
USP46-208ENST00000512656 ZSCAN31Q96LW9 406 aaPredicted RBP7.9□□□□□ -1.14
USP46-208ENST00000512656 TTPALQ9BTX7 342 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 SMOC2Q9H3U7 446 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 PDZD7Q9H5P4 517 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 SNTG2Q9NY99 539 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 WNT16Q9UBV4 365 aa7.9□□□□□ -1.14
USP46-208ENST00000512656 KMT2EQ8IZD2 1858 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 ARID2Q68CP9 1835 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 CASTOR2A6NHX0 329 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 C9orf172C9J069 976 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 TRAPPC3O43617 180 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 N4BP1O75113 896 aaKnown RBP7.89□□□□□ -1.15
USP46-208ENST00000512656 RECQL4O94761 1208 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 MYBP10242 640 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 SRFP11831 508 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 LAMP2P13473 410 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 LIG1P18858 919 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 HOXA9P31269 272 aa7.89□□□□□ -1.15
USP46-208ENST00000512656 YARSP54577 528 aaKnown RBP7.89□□□□□ -1.15
USP46-208ENST00000512656 DOC2BQ14184 412 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms