RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 EXOC1Q9NV70 894 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 AGAP1Q9UPQ3 857 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 KMT2EQ8IZD2 1858 aa17.81■□□□□ 0.44
DDX41-213ENST00000512027 A0A1W2PQ27 194 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 A0A1W2PQ64 194 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 A0A1W2PQD8 194 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 ARHGEF37A1IGU5 675 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 NRG2O14511 850 aaPredicted RBP17.8■□□□□ 0.44
DDX41-213ENST00000512027 CYB561D2O14569 222 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 LRG1P02750 347 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 BMT2Q1RMZ1 405 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 SLC5A9Q2M3M2 681 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 WSCD1Q658N2 575 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 TPGS2Q68CL5 300 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 NT5DC4Q86YG4 428 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 TCEAL8Q8IYN2 117 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 TTC9BQ8N6N2 239 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 CXorf38Q8TB03 319 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 RTP3Q9BQQ7 232 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 AFF4Q9UHB7 1163 aaKnown RBP17.8■□□□□ 0.44
DDX41-213ENST00000512027 SIX4Q9UIU6 781 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 ZNF318Q5VUA4 2279 aa17.8■□□□□ 0.44
DDX41-213ENST00000512027 WDFY4Q6ZS81 3184 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 ZNF233A6NK53 670 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 KPNA7A9QM74 516 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 NARSO43776 548 aaKnown RBP17.79■□□□□ 0.44
DDX41-213ENST00000512027 RPN1P04843 607 aaKnown RBP17.79■□□□□ 0.44
DDX41-213ENST00000512027 KRT19P08727 400 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 TMEM191BP0C7N4 346 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 LAMP2P13473 410 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 BFSP1Q12934 665 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 SNRNP35Q16560 246 aaKnown RBP17.79■□□□□ 0.44
DDX41-213ENST00000512027 PABPC1LQ4VXU2 614 aaKnown RBP17.79■□□□□ 0.44
DDX41-213ENST00000512027 POTEHQ6S545 545 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 KRBA2Q6ZNG9 492 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 CSGALNACT2Q8N6G5 542 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 ZNF560Q96MR9 790 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 CORO1BQ9BR76 489 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 EPS15L1Q9UBC2 864 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 USP25Q9UHP3 1055 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 YIPF1Q9Y548 306 aa17.79■□□□□ 0.44
DDX41-213ENST00000512027 ZDBF2Q9HCK1 2354 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 MTMR11A4FU01 709 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 OR6C75A6NL08 312 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 KIAA0391O15091 583 aaKnown RBP17.78■□□□□ 0.44
DDX41-213ENST00000512027 SOAT2O75908 522 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 CYP11A1P05108 521 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 RHOP08100 348 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 POU2F2P09086 479 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 NUCB2P80303 420 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 TWF1Q12792 350 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 KNOP1Q1ED39 458 aaKnown RBP17.78■□□□□ 0.44
DDX41-213ENST00000512027 SV2CQ496J9 727 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 HS2ST1Q7LGA3 356 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 HS6ST3Q8IZP7 471 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 ATAD1Q8NBU5 361 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 CACTINQ8WUQ7 758 aaKnown RBP17.78■□□□□ 0.44
DDX41-213ENST00000512027 FGF13Q92913 245 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 PBXIP1Q96AQ6 731 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 TCEAL4Q96EI5 215 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 INTS13Q9NVM9 706 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 CEP72Q9P209 647 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 SLC27A5Q9Y2P5 690 aa17.78■□□□□ 0.44
DDX41-213ENST00000512027 HCRTO43612 131 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 ZNF202O95125 648 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 DLATP10515 647 aaKnown RBP17.77■□□□□ 0.44
DDX41-213ENST00000512027 CEBPBP17676 345 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 CCR2P41597 374 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 DPYDQ12882 1025 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 DUSP4Q13115 394 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 GPR17Q13304 367 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 TDGQ13569 410 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 SLC39A12Q504Y0 691 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 NPAS3Q8IXF0 933 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 XXYLT1Q8NBI6 393 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 FGF14Q92915 247 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 CCDC127Q96BQ5 260 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 ANKRD36BP1Q96IX9 119 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 RPP25Q9BUL9 199 aaKnown RBP17.77■□□□□ 0.44
DDX41-213ENST00000512027 GZF1Q9H116 711 aaPredicted RBP17.77■□□□□ 0.44
DDX41-213ENST00000512027 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.77■□□□□ 0.44
DDX41-213ENST00000512027 ITGA11Q9UKX5 1188 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 CDH7Q9ULB5 785 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 L1RE1Q9UN81 338 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 MRPS23Q9Y3D9 190 aaKnown RBP17.77■□□□□ 0.44
DDX41-213ENST00000512027 NUMBLQ9Y6R0 609 aa17.77■□□□□ 0.44
DDX41-213ENST00000512027 MUC6Q6W4X9 2439 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 PTPN2P17706 415 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 CASP4P49662 377 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 CYP24A1Q07973 514 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 HTR4Q13639 388 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 MYBPC2Q14324 1141 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 CCDC142Q17RM4 750 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 CENPPQ6IPU0 288 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 PARM1Q6UWI2 310 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 RTL10Q7L3V2 364 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 LRRTM3Q86VH5 581 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 METTL23Q86XA0 190 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 UBALD2Q8IYN6 164 aa17.76■□□□□ 0.43
DDX41-213ENST00000512027 PLEKHO2Q8TD55 490 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms