RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 LAMP2P13473 410 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 TYMPP19971 482 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 SYKP43405 635 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 POU5F1Q01860 360 aaKnown RBP14.35□□□□□ -0.11
RNF4-215ENST00000511843 TWF1Q12792 350 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 KMT5BQ4FZB7 885 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 PABPC1LQ4VXU2 614 aaKnown RBP14.35□□□□□ -0.11
RNF4-215ENST00000511843 WSCD1Q658N2 575 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 TPGS2Q68CL5 300 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 TCEAL8Q8IYN2 117 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 KIAA0895Q8NCT3 520 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 OR5B17Q8NGF7 314 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 OR10T2Q8NGX3 314 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 BORCS6Q96GS4 357 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 RTP3Q9BQQ7 232 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 CORO1BQ9BR76 489 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 EXOC1Q9NV70 894 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 AFF4Q9UHB7 1163 aaKnown RBP14.35□□□□□ -0.11
RNF4-215ENST00000511843 ATP6V1DQ9Y5K8 247 aa14.35□□□□□ -0.11
RNF4-215ENST00000511843 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.35□□□□□ -0.11
RNF4-215ENST00000511843 OBSL1O75147 1896 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 PVALEFA0A1B0GWK0 134 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 KPNA7A9QM74 516 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 RHOP08100 348 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 KRT19P08727 400 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 BFSP1Q12934 665 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 STK4Q13043 487 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 TDGQ13569 410 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 SV2CQ496J9 727 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 POTEHQ6S545 545 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 HS6ST3Q8IZP7 471 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 CSGALNACT2Q8N6G5 542 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 CXorf38Q8TB03 319 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 FGF13Q92913 245 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 TCEAL4Q96EI5 215 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 RPP25Q9BUL9 199 aaKnown RBP14.34□□□□□ -0.11
RNF4-215ENST00000511843 SCAND2PQ9GZW5 306 aaPredicted RBP14.34□□□□□ -0.11
RNF4-215ENST00000511843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.34□□□□□ -0.11
RNF4-215ENST00000511843 CEP72Q9P209 647 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 SIX4Q9UIU6 781 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 CDH7Q9ULB5 785 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 SLC27A5Q9Y2P5 690 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 YIPF1Q9Y548 306 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 DENND4CQ5VZ89 1909 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 UBE4BO95155 1302 aa14.34□□□□□ -0.11
RNF4-215ENST00000511843 MTMR11A4FU01 709 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 OR6C75A6NL08 312 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 TMEM191BP0C7N4 346 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 CEBPBP17676 345 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 VCPP55072 806 aaKnown RBP14.33□□□□□ -0.12
RNF4-215ENST00000511843 DUSP4Q13115 394 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 HTR4Q13639 388 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 SNRNP35Q16560 246 aaKnown RBP14.33□□□□□ -0.12
RNF4-215ENST00000511843 BMT2Q1RMZ1 405 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 PARM1Q6UWI2 310 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 NT5DC4Q86YG4 428 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 NPAS3Q8IXF0 933 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 UBALD2Q8IYN6 164 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 SLC44A3Q8N4M1 653 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 ATAD1Q8NBU5 361 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 CACTINQ8WUQ7 758 aaKnown RBP14.33□□□□□ -0.12
RNF4-215ENST00000511843 FGF14Q92915 247 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 ZNF560Q96MR9 790 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 INTS13Q9NVM9 706 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 NUMBLQ9Y6R0 609 aa14.33□□□□□ -0.12
RNF4-215ENST00000511843 FAM237AA0A1B0GTK4 181 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 A0A1W2PQ27 194 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 A0A1W2PQ64 194 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 A0A1W2PQD8 194 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 ANHXE9PGG2 379 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 KIAA0391O15091 583 aaKnown RBP14.32□□□□□ -0.12
RNF4-215ENST00000511843 HCRTO43612 131 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 RPN1P04843 607 aaKnown RBP14.32□□□□□ -0.12
RNF4-215ENST00000511843 CYP11A1P05108 521 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 CFHP08603 1231 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 POU2F2P09086 479 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 DLATP10515 647 aaKnown RBP14.32□□□□□ -0.12
RNF4-215ENST00000511843 GJA1P17302 382 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 PTPN2P17706 415 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 CCR2P41597 374 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 GPR17Q13304 367 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 KNOP1Q1ED39 458 aaKnown RBP14.32□□□□□ -0.12
RNF4-215ENST00000511843 SLC39A12Q504Y0 691 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 IER5LQ5T953 404 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 KRBA2Q6ZNG9 492 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 BMP8AQ7Z5Y6 402 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 LRRTM3Q86VH5 581 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 FBXL6Q8N531 539 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 CCDC127Q96BQ5 260 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 MCRS1Q96EZ8 462 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 MFSD14AQ96MC6 490 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 KXD1Q9BQD3 176 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 IGSF9Q9P2J2 1179 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 USP25Q9UHP3 1055 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 ITGA11Q9UKX5 1188 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 L1RE1Q9UN81 338 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 DUSP12Q9UNI6 340 aa14.32□□□□□ -0.12
RNF4-215ENST00000511843 MRPS23Q9Y3D9 190 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms