RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 TLR10Q9BXR5 811 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 TRIM54Q9BYV2 358 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 TINAGL1Q9GZM7 467 aaPredicted RBP4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 SIK2Q9H0K1 926 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 GPR35Q9HC97 309 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 XDHP47989 1333 aa4.2□□□□□ -1.74
TRAPPC11-207ENST00000511409 MYO1FO00160 1098 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 POLRMTO00411 1230 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 MUSKO15146 869 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZNF185O15231 689 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 SUV39H1O43463 412 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 ERN1O75460 977 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 KIF20AO95235 890 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 CHEK2O96017 543 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 GRPP07492 148 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 SPATA31D3P0C874 917 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 FCER1AP12319 257 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 TNFRSF1AP19438 455 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 EN2P19622 333 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PIK3CBP42338 1070 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PRIM2P49643 509 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PTTG1IPP53801 180 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PIGFQ07326 219 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PUM1Q14671 1186 aaKnown RBP eCLIP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 AMOTQ4VCS5 1084 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 SLC44A4Q53GD3 710 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 C3orf38Q5JPI3 329 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 FAM102AQ5T9C2 384 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 LMBRD2Q68DH5 695 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 SLC30A10Q6XR72 485 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 SPATA31D4Q6ZUB0 917 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 SRLQ86TD4 932 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 LIX1LQ8IVB5 337 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZFPM1Q8IX07 1006 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 RHOT2Q8IXI1 618 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 KRT78Q8N1N4 520 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 CCDC33Q8N5R6 958 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 NSUN7Q8NE18 718 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 ACRBPQ8NEB7 543 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 FAM46DQ8NEK8 389 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 OR56A1Q8NGH5 318 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 DDX17Q92841 729 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PMM1Q92871 262 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PHKBQ93100 1093 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 STRBPQ96SI9 672 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 CDK5RAP1Q96SZ6 601 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 SMOQ99835 787 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 MYD88Q99836 296 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZSWIM1Q9BR11 485 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 KLC2Q9H0B6 622 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 BTBD1Q9H0C5 482 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZNF700Q9H0M5 742 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 RNPEPQ9H4A4 650 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PNPLA8Q9NP80 782 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 AFF4Q9UHB7 1163 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 AGAP1Q9UPQ3 857 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 MED16Q9Y2X0 877 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 MTO1Q9Y2Z2 717 aaKnown RBP4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 TMX2Q9Y320 296 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 TSC22D4Q9Y3Q8 395 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 PLEKHM1Q9Y4G2 1056 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 TESMINQ9Y4I5 508 aa4.19□□□□□ -1.74
TRAPPC11-207ENST00000511409 POM121BA6NF01 834 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 DIRC3C9JPN6 131 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 AKAP8O43823 692 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 FAM20BO75063 409 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 RPS6KA4O75676 772 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 ABHD16AO95870 558 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 GPANK1O95872 356 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 THP07101 528 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 INSRRP14616 1297 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 RPL17P18621 184 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 CHRM3P20309 590 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 GCSHP23434 173 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 ACRV1P26436 265 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 HSD11B2P80365 405 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 KRTAP1-1Q07627 177 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 SLFN5Q08AF3 891 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 ZNF844Q08AG5 666 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 CTBP1Q13363 440 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 RAB32Q13637 225 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 R3HDM1Q15032 1099 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 CDSNQ15517 529 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 PDCD4Q53EL6 469 aaKnown RBP4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 AGAP9Q5VTM2 703 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 NAIF1Q69YI7 327 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 GDF7Q7Z4P5 450 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 SESTD1Q86VW0 696 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 FAM186BQ8IYM0 893 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 CFAP52Q8N1V2 620 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 SLC15A4Q8N697 577 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 SAMD3Q8N6K7 520 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 DNAJC5GQ8N7S2 189 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 CCDC138Q96M89 665 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 NEU1Q99519 415 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 GPR20Q99678 358 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 CNPPD1Q9BV87 410 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 KLHL11Q9NVR0 708 aa4.18□□□□□ -1.74
TRAPPC11-207ENST00000511409 STK32BQ9NY57 414 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms