RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 SLC17A8Q8NDX2 589 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 OR2W6PQ8NHA6 318 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 FGFBP2Q9BYJ0 223 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 PPP1R12CQ9BZL4 782 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 UNC45AQ9H3U1 944 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 SMARCAD1Q9H4L7 1026 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 VAV3Q9UKW4 847 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 USP20Q9Y2K6 914 aa13.69□□□□□ -0.22
HMGB2-205ENST00000511316 EYSQ5T1H1 3165 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
HMGB2-205ENST00000511316 EML1O00423 815 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 TLR3O15455 904 aaKnown RBP13.68□□□□□ -0.22
HMGB2-205ENST00000511316 ZNF862O60290 1169 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 STBD1O95210 358 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 SPATA31C1P0DKV0 1188 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 ITGA4P13612 1032 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 TMOD1P28289 359 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 STAT5BP51692 787 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 GPC5P78333 572 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 MYL7Q01449 175 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 CALCOCO2Q13137 446 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 SHHQ15465 462 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 SWSAP1Q6NVH7 229 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 INTS8Q75QN2 995 aaKnown RBP13.68□□□□□ -0.22
HMGB2-205ENST00000511316 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 CCDC63Q8NA47 563 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 C12orf50Q8NA57 414 aaPredicted RBP13.68□□□□□ -0.22
HMGB2-205ENST00000511316 GRAMD1AQ96CP6 724 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 ZBTB10Q96DT7 871 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 SERPINB12Q96P63 405 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 DPH5Q9H2P9 285 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 ERAP1Q9NZ08 941 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 PRKAG2Q9UGJ0 569 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 CHD7Q9P2D1 2997 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 COL6A3P12111 3177 aa13.68□□□□□ -0.22
HMGB2-205ENST00000511316 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 NDC80O14777 642 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 SUN1O94901 812 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 IQCF3P0C7M6 154 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 CHN1P15882 459 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 MARK3P27448 753 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 CASP5P51878 434 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 CCL23P55773 120 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 TNFAIP8L3Q5GJ75 292 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 GLYCTKQ8IVS8 523 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 BBOF1Q8ND07 529 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 LNX1Q8TBB1 728 aaPredicted RBP13.67□□□□□ -0.22
HMGB2-205ENST00000511316 SCLYQ96I15 445 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 FAM81BQ96LP2 452 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 NACC1Q96RE7 527 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 ZSWIM1Q9BR11 485 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 INTS2Q9H0H0 1204 aaKnown RBP13.67□□□□□ -0.22
HMGB2-205ENST00000511316 TMEM206Q9H813 350 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 DMAC2Q9NW81 257 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 WHRNQ9P202 907 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 CNOT8Q9UFF9 292 aaKnown RBP13.67□□□□□ -0.22
HMGB2-205ENST00000511316 PCDHA10Q9Y5I2 948 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 NPHP3-ACAD11A0A0J9YXS1 232 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 RASGRF2O14827 1237 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 CAND2O75155 1236 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 RTN2O75298 545 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 CKBP12277 381 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 CALRP27797 417 aaKnown RBP13.67□□□□□ -0.22
HMGB2-205ENST00000511316 HOXD13P35453 343 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 SKIV2L2P42285 1042 aaKnown RBP13.67□□□□□ -0.22
HMGB2-205ENST00000511316 KRT76Q01546 638 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 PTK7Q13308 1070 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
HMGB2-205ENST00000511316 MBTPS1Q14703 1052 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 TMEM240Q5SV17 173 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 RASIP1Q5U651 963 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 TRPM8Q7Z2W7 1104 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 TET1Q8NFU7 2136 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 GRK7Q8WTQ7 553 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 GLG1Q92896 1179 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 AGPAT1Q99943 283 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 FOXP3Q9BZS1 431 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
HMGB2-205ENST00000511316 UVRAGQ9P2Y5 699 aa13.67□□□□□ -0.22
HMGB2-205ENST00000511316 NRCAMQ92823 1304 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 A0A1W2PPC1 479 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 SOX1O00570 391 aaPredicted RBP13.66□□□□□ -0.22
HMGB2-205ENST00000511316 TCEA3O75764 348 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 INSRRP14616 1297 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 PPP2R5CQ13362 524 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 UGCGQ16739 394 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 QPCTQ16769 361 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 RINT1Q6NUQ1 792 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 C12orf56Q8IXR9 622 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 TDHQ8IZJ6 230 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 ATP6V0A1Q93050 837 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 SELENOSQ9BQE4 189 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 LBHD1Q9BQE6 289 aaPredicted RBP13.66□□□□□ -0.22
HMGB2-205ENST00000511316 EIF2AK1Q9BQI3 630 aaKnown RBP13.66□□□□□ -0.22
HMGB2-205ENST00000511316 BHMT2Q9H2M3 363 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 HAUS2Q9NVX0 235 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 TPX2Q9ULW0 747 aaKnown RBP13.66□□□□□ -0.22
HMGB2-205ENST00000511316 ACTL7BQ9Y614 415 aa13.66□□□□□ -0.22
HMGB2-205ENST00000511316 C17orf102A2RUQ5 167 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms