RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 ZNF707Q96C28 371 aaPredicted RBP16.78■□□□□ 0.28
SH3TC1-220ENST00000511002 RIPOR3Q96MK2 946 aa16.78■□□□□ 0.28
SH3TC1-220ENST00000511002 CGRRF1Q99675 332 aa16.78■□□□□ 0.28
SH3TC1-220ENST00000511002 LRFN3Q9BTN0 628 aa16.78■□□□□ 0.28
SH3TC1-220ENST00000511002 FUCA2Q9BTY2 467 aa16.78■□□□□ 0.28
SH3TC1-220ENST00000511002 MTMR12Q9C0I1 747 aa16.78■□□□□ 0.28
SH3TC1-220ENST00000511002 MTRRQ9UBK8 725 aa16.78■□□□□ 0.28
SH3TC1-220ENST00000511002 SCN1AP35498 2009 aa16.78■□□□□ 0.28
SH3TC1-220ENST00000511002 DOCK8Q8NF50 2099 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 CCDC195A0A1B0GUA6 201 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 LRRIQ3A6PVS8 624 aaPredicted RBP16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 MAPK13O15264 365 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 SLC16A3O15427 465 aaKnown RBP16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 EPB41P11171 864 aaKnown RBP16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 ERCC5P28715 1186 aaPredicted RBP16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 SURF1Q15526 300 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 ATAT1Q5SQI0 421 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 SCARA3Q6AZY7 606 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 WDR49Q8IV35 697 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 KREMEN2Q8NCW0 462 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 BEST2Q8NFU1 509 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 PARD3BQ8TEW8 1205 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 BORCS6Q96GS4 357 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 CEP63Q96MT8 703 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 FNBP1Q96RU3 617 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 TSPAN18Q96SJ8 248 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 MKNK1Q9BUB5 465 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 C1QTNF1Q9BXJ1 281 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 INTS13Q9NVM9 706 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 FBXW11Q9UKB1 542 aa16.77■□□□□ 0.28
SH3TC1-220ENST00000511002 XPOTO43592 962 aaKnown RBP16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 TRIM49P0CI25 452 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 TRIM49CP0CI26 452 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 TNNI1P19237 187 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 CYP3A5P20815 502 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 LRPAP1P30533 357 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 RPL9P32969 192 aaKnown RBP16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 OR1D2P34982 312 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 BFSP1Q12934 665 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 ANO6Q4KMQ2 910 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 C1orf220Q5T0J3 134 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 INTS8Q75QN2 995 aaKnown RBP16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 NT5DC4Q86YG4 428 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 CMASQ8NFW8 434 aaPredicted RBP16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 NECTIN4Q96NY8 510 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 SRRTQ9BXP5 876 aaKnown RBP16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 DPP3Q9NY33 737 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 NUB1Q9Y5A7 615 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 CDY1Q9Y6F8 540 aa16.76■□□□□ 0.27
SH3TC1-220ENST00000511002 TSC2P49815 1807 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 N4BP1O75113 896 aaKnown RBP16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 TMEM191BP0C7N4 346 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 CCDC192P0DO97 292 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 KRT13P13646 458 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 VAMP7P51809 220 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 CREMQ03060 361 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 RAB33AQ14088 237 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 CT47A1Q5JQC4 288 aaPredicted RBP16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 TMEM31Q5JXX7 168 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 C9orf57Q5W0N0 161 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 FILIP1Q7Z7B0 1213 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 C1orf127Q8N9H9 656 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 TMC2Q8TDI7 906 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 SMG7Q92540 1137 aaKnown RBP16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 ZNF516Q92618 1163 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 SUSD3Q96L08 255 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 SMOC2Q9H3U7 446 aa16.75■□□□□ 0.27
SH3TC1-220ENST00000511002 NOTCH4Q99466 2003 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 TBC1D4O60343 1298 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 GPR37L1O60883 481 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 ZMYND10O75800 440 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 PAPLNO95428 1278 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 TNNC2P02585 160 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 ITGB3P05106 788 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 ASGR2P07307 311 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 ALADP13716 330 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 CLDN10P78369 228 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 CCDC40Q4G0X9 1142 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 CXorf38Q8TB03 319 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 HDAC7Q8WUI4 952 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 CACTINQ8WUQ7 758 aaKnown RBP16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 ANKRD36BP1Q96IX9 119 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 PLEKHA4Q9H4M7 779 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 ARMCX3Q9UH62 379 aaPredicted RBP16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 SIX4Q9UIU6 781 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 TIMM13Q9Y5L4 95 aaPredicted RBP16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 BACE2Q9Y5Z0 518 aa16.74■□□□□ 0.27
SH3TC1-220ENST00000511002 ANO9A1A5B4 782 aa16.73■□□□□ 0.27
SH3TC1-220ENST00000511002 SYN3O14994 580 aa16.73■□□□□ 0.27
SH3TC1-220ENST00000511002 SPTLC1O15269 473 aa16.73■□□□□ 0.27
SH3TC1-220ENST00000511002 TRAPPC3O43617 180 aa16.73■□□□□ 0.27
SH3TC1-220ENST00000511002 C8AP07357 584 aa16.73■□□□□ 0.27
SH3TC1-220ENST00000511002 COL9A1P20849 921 aa16.73■□□□□ 0.27
SH3TC1-220ENST00000511002 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms