RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 KREMEN1Q96MU8 473 aa14.41□□□□□ -0.1
LETM1-204ENST00000510940 RAD9AQ99638 391 aa14.41□□□□□ -0.1
LETM1-204ENST00000510940 BAG1Q99933 345 aaPredicted RBP14.41□□□□□ -0.1
LETM1-204ENST00000510940 SNX25Q9H3E2 840 aa14.41□□□□□ -0.1
LETM1-204ENST00000510940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.41□□□□□ -0.1
LETM1-204ENST00000510940 CISHQ9NSE2 258 aa14.41□□□□□ -0.1
LETM1-204ENST00000510940 KIAA1257Q9ULG3 409 aa14.41□□□□□ -0.1
LETM1-204ENST00000510940 BARX2Q9UMQ3 279 aaPredicted RBP14.41□□□□□ -0.1
LETM1-204ENST00000510940 RWDD3Q9Y3V2 267 aa14.41□□□□□ -0.1
LETM1-204ENST00000510940 PCDHB4Q9Y5E5 795 aa14.41□□□□□ -0.1
LETM1-204ENST00000510940 MKI67P46013 3256 aaKnown RBP14.4□□□□□ -0.1
LETM1-204ENST00000510940 FOXN3O00409 490 aaPredicted RBP14.4□□□□□ -0.1
LETM1-204ENST00000510940 CYB561D2O14569 222 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 GFPT2O94808 682 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 DDHD2O94830 711 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 IPO7O95373 1038 aaKnown RBP14.4□□□□□ -0.1
LETM1-204ENST00000510940 PPM1AP35813 382 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 MAGEA10P43363 369 aaPredicted RBP14.4□□□□□ -0.1
LETM1-204ENST00000510940 KLHL30Q0D2K2 578 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 MEA1Q16626 185 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 PAN2Q504Q3 1202 aaKnown RBP14.4□□□□□ -0.1
LETM1-204ENST00000510940 TDRD12Q587J7 1177 aaKnown RBP14.4□□□□□ -0.1
LETM1-204ENST00000510940 SCARA5Q6ZMJ2 495 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 ZNF677Q86XU0 584 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 ZNF280BQ86YH2 543 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 SUSD3Q96L08 255 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 SENP8Q96LD8 212 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 ZNF558Q96NG5 402 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 GDF15Q99988 308 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 DEF6Q9H4E7 631 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 CNTN6Q9UQ52 1028 aa14.4□□□□□ -0.1
LETM1-204ENST00000510940 SF3B1O75533 1304 aaKnown RBP eCLIP14.4□□□□□ -0.16e-6■■■■■ 86.2
LETM1-204ENST00000510940 SSU72P8A0A1W2PR75 194 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 NRP1O14786 923 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 SYN3O14994 580 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 MED7O43513 233 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 TLL1O43897 1013 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 LRRN2O75325 713 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 GALTP07902 379 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 PAEPP09466 180 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 WEE2P0C1S8 567 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 TYMPP19971 482 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 WARSP23381 471 aaKnown RBP14.39□□□□□ -0.11
LETM1-204ENST00000510940 DEKP35659 375 aaKnown RBP14.39□□□□□ -0.11
LETM1-204ENST00000510940 CYLC1P35663 651 aaPredicted RBP14.39□□□□□ -0.11
LETM1-204ENST00000510940 PRKCIP41743 596 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 PDE6CP51160 858 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 HTRA4P83105 476 aaPredicted RBP14.39□□□□□ -0.11
LETM1-204ENST00000510940 APBA1Q02410 837 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 INCA1Q0VD86 236 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 PPP1R2P3Q6NXS1 205 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 FAM117BQ6P1L5 589 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 TMEM270Q6UE05 265 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 HERC6Q8IVU3 1022 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 CCDC170Q8IYT3 715 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 THEM5Q8N1Q8 247 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 TXLNBQ8N3L3 684 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 FIBCD1Q8N539 461 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 TNIP3Q96KP6 325 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 RNPC3Q96LT9 517 aaKnown RBP14.39□□□□□ -0.11
LETM1-204ENST00000510940 NT5C1AQ9BXI3 368 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 OXCT2Q9BYC2 517 aaPredicted RBP14.39□□□□□ -0.11
LETM1-204ENST00000510940 LUC7LQ9NQ29 371 aaKnown RBP14.39□□□□□ -0.11
LETM1-204ENST00000510940 ADAM28Q9UKQ2 775 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 PCDHB8Q9UN66 801 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 POLIQ9UNA4 740 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 PCDHB12Q9Y5F1 795 aa14.39□□□□□ -0.11
LETM1-204ENST00000510940 M0QZQ0 153 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 PPEF2O14830 753 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 ARHGAP6O43182 974 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 CILPO75339 1184 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 CYP11A1P05108 521 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 CD58P19256 250 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 FECHP22830 423 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 PCSK1P29120 753 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 GNL1P36915 607 aaPredicted RBP14.38□□□□□ -0.11
LETM1-204ENST00000510940 GATMP50440 423 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 EPHB4P54760 987 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 BCAR1P56945 870 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 ARID5AQ03989 594 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 STILQ15468 1287 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 RASIP1Q5U651 963 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 LIMS2Q7Z4I7 341 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 ADGRF2Q8IZF7 708 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 RBBP8NLQ8NC74 664 aaPredicted RBP14.38□□□□□ -0.11
LETM1-204ENST00000510940 OR6B3Q8NGW1 331 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 CCDC42Q96M95 316 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 SMYD3Q9H7B4 428 aa14.38□□□□□ -0.11
LETM1-204ENST00000510940 RC3H2Q9HBD1 1191 aaKnown RBP14.38□□□□□ -0.11
LETM1-204ENST00000510940 PRG3Q9Y2Y8 225 aaPredicted RBP14.38□□□□□ -0.11
LETM1-204ENST00000510940 COL4A6Q14031 1691 aa14.37□□□□□ -0.11
LETM1-204ENST00000510940 RNF225M0QZC1 329 aaPredicted RBP14.37□□□□□ -0.11
LETM1-204ENST00000510940 ACO1P21399 889 aaKnown RBP14.37□□□□□ -0.11
LETM1-204ENST00000510940 SLC11A1P49279 550 aa14.37□□□□□ -0.11
LETM1-204ENST00000510940 KRT17Q04695 432 aa14.37□□□□□ -0.11
LETM1-204ENST00000510940 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
LETM1-204ENST00000510940 BMS1Q14692 1282 aaKnown RBP14.37□□□□□ -0.11
LETM1-204ENST00000510940 SOWAHAQ2M3V2 549 aa14.37□□□□□ -0.11
LETM1-204ENST00000510940 TIGD5Q53EQ6 642 aa14.37□□□□□ -0.11
LETM1-204ENST00000510940 KCNT2Q6UVM3 1135 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms