RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 KREMEN2Q8NCW0 462 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 B3GALT6Q96L58 329 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 PHF7Q9BWX1 381 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-221ENST00000510541 MTMR12Q9C0I1 747 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 FAM124BQ9H5Z6 455 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-221ENST00000510541 MAN1C1Q9NR34 630 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 AFF4Q9UHB7 1163 aaKnown RBP18.6■□□□□ 0.57
CLDND1-221ENST00000510541 USP15Q9Y4E8 981 aaPredicted RBP18.6■□□□□ 0.57
CLDND1-221ENST00000510541 CUL9Q8IWT3 2517 aa18.6■□□□□ 0.57
CLDND1-221ENST00000510541 PLXNA3P51805 1871 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 PTPRJQ12913 1337 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 GABRDO14764 452 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 CETN3O15182 167 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 C4BPAP04003 597 aaKnown RBP18.59■□□□□ 0.57
CLDND1-221ENST00000510541 PRKCSHP14314 528 aaPredicted RBP18.59■□□□□ 0.57
CLDND1-221ENST00000510541 TNNI1P19237 187 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 BMP6P22004 513 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 POLR2BP30876 1174 aaKnown RBP18.59■□□□□ 0.57
CLDND1-221ENST00000510541 GUCY2FP51841 1108 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 ROR1Q01973 937 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 GPR17Q13304 367 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 ZACNQ401N2 412 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 CTXN3Q4LDR2 81 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 ATAT1Q5SQI0 421 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 OR5B17Q8NGF7 314 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 C2orf15Q8WU43 125 aaKnown RBP18.59■□□□□ 0.57
CLDND1-221ENST00000510541 TAF4BQ92750 862 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 CEP63Q96MT8 703 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 TSG101Q99816 390 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 CLSTN2Q9H4D0 955 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 AVENQ9NQS1 362 aaPredicted RBP18.59■□□□□ 0.57
CLDND1-221ENST00000510541 AGAP1Q9UPQ3 857 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 R3HCC1Q9Y3T6 440 aaKnown RBP18.59■□□□□ 0.57
CLDND1-221ENST00000510541 CDY1Q9Y6F8 540 aa18.59■□□□□ 0.57
CLDND1-221ENST00000510541 BICDL2A1A5D9 508 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 PPP1R3GB7ZBB8 358 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 I3L4J1 428 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 CYB561D2O14569 222 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 PMM2O15305 246 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 AKAP3O75969 853 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 CA8P35219 290 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 LHX1P48742 406 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 RBM10P98175 930 aaKnown RBP18.58■□□□□ 0.56
CLDND1-221ENST00000510541 ZP2Q05996 745 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 BFSP1Q12934 665 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 SMYD5Q6GMV2 418 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 RSPO2Q6UXX9 243 aaPredicted RBP18.58■□□□□ 0.56
CLDND1-221ENST00000510541 METTL23Q86XA0 190 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 RDH13Q8NBN7 331 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 PLEKHO2Q8TD55 490 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 ADAMTS19Q8TE59 1207 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 ZNF516Q92618 1163 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 SYAP1Q96A49 352 aaPredicted RBP18.58■□□□□ 0.56
CLDND1-221ENST00000510541 ACBD6Q9BR61 282 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 PRKD2Q9BZL6 878 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 TSC2P49815 1807 aa18.58■□□□□ 0.56
CLDND1-221ENST00000510541 WDR27A2RRH5 827 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 LRRIQ3A6PVS8 624 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-221ENST00000510541 LOC730098B7Z3J9 87 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 ADAM12O43184 909 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 STX10O60499 249 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 TACC1O75410 805 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 CSPG5O95196 566 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 DLATP10515 647 aaKnown RBP18.57■□□□□ 0.56
CLDND1-221ENST00000510541 CASP4P49662 377 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 VAMP7P51809 220 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 MARSP56192 900 aaKnown RBP18.57■□□□□ 0.56
CLDND1-221ENST00000510541 LIN9Q5TKA1 542 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 LLGL2Q6P1M3 1020 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 RBM43Q6ZSC3 357 aaKnown RBP18.57■□□□□ 0.56
CLDND1-221ENST00000510541 EP400NLQ6ZTU2 488 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 FILIP1Q7Z7B0 1213 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 THEM5Q8N1Q8 247 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 MLKLQ8NB16 471 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 ZNF707Q96C28 371 aaPredicted RBP18.57■□□□□ 0.56
CLDND1-221ENST00000510541 HPDLQ96IR7 371 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 XYLT2Q9H1B5 865 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 METTL14Q9HCE5 456 aaKnown RBP18.57■□□□□ 0.56
CLDND1-221ENST00000510541 MAPK8IP1Q9UQF2 711 aa18.57■□□□□ 0.56
CLDND1-221ENST00000510541 HUS1O60921 280 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 KRT13P13646 458 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 IL9P15248 144 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 RPL17P18621 184 aaKnown RBP18.56■□□□□ 0.56
CLDND1-221ENST00000510541 C1orf220Q5T0J3 134 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 ANKRD40Q6AI12 368 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 TTI2Q6NXR4 508 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 PALB2Q86YC2 1186 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 FAM186BQ8IYM0 893 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 SMYD4Q8IYR2 804 aaPredicted RBP18.56■□□□□ 0.56
CLDND1-221ENST00000510541 CCDC127Q96BQ5 260 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 CEP295NLQ96MC4 621 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 UHRF1Q96T88 793 aaPredicted RBP18.56■□□□□ 0.56
CLDND1-221ENST00000510541 ZCWPW1Q9H0M4 648 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 WDR6Q9NNW5 1121 aaKnown RBP18.56■□□□□ 0.56
CLDND1-221ENST00000510541 ZFP37Q9Y6Q3 630 aaPredicted RBP18.56■□□□□ 0.56
CLDND1-221ENST00000510541 DENND4AQ7Z401 1863 aa18.56■□□□□ 0.56
CLDND1-221ENST00000510541 MUC3AQ02505 3323 aa18.55■□□□□ 0.56
CLDND1-221ENST00000510541 CCDC195A0A1B0GUA6 201 aa18.55■□□□□ 0.56
CLDND1-221ENST00000510541 MICAL2O94851 1124 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms