RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 BRSK2Q8IWQ3 736 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 CCDC65Q8IXS2 484 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 KCNG4Q8TDN1 519 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 ING5Q8WYH8 240 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 HPS3Q969F9 1004 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 NXPE3Q969Y0 559 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 DHX58Q96C10 678 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 CBWD1Q9BRT8 395 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 RBSNQ9H1K0 784 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 TSPY26PQ9H489 355 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 CYP4F11Q9HBI6 524 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 AVENQ9NQS1 362 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-203ENST00000510217 AFF4Q9UHB7 1163 aaKnown RBP11.14□□□□□ -0.63
PFDN1-203ENST00000510217 KCNH3Q9ULD8 1083 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 COL4A2P08572 1712 aa11.14□□□□□ -0.63
PFDN1-203ENST00000510217 ZDBF2Q9HCK1 2354 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 KRBA1A5PL33 1030 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 PRPF6O94906 941 aaKnown RBP11.13□□□□□ -0.63
PFDN1-203ENST00000510217 IL18RAPO95256 599 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 ODC1P11926 461 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 CEBPBP17676 345 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 GARTP22102 1010 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 PTPN5P54829 565 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 ASIC1P78348 528 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 DNM1Q05193 864 aaKnown RBP11.13□□□□□ -0.63
PFDN1-203ENST00000510217 TWF1Q12792 350 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 POSTNQ15063 836 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 PRSS36Q5K4E3 855 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-203ENST00000510217 OVOS1Q6IE37 1185 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 CNNM4Q6P4Q7 775 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 POTEHQ6S545 545 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 ZSCAN30Q86W11 494 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 SIX5Q8N196 739 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 SENP8Q96LD8 212 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 TMEM209Q96SK2 561 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 PRRX2Q99811 253 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 CORO1BQ9BR76 489 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 FAM213AQ9BRX8 229 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 RPP25Q9BUL9 199 aaKnown RBP11.13□□□□□ -0.63
PFDN1-203ENST00000510217 OXCT2Q9BYC2 517 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-203ENST00000510217 CRISPLD1Q9H336 500 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 MFSD1Q9H3U5 465 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 MAGEF1Q9HAY2 307 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 DPP3Q9NY33 737 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 FBXL21Q9UKT6 434 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 MAFFQ9ULX9 164 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 PCDHA7Q9UN72 937 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 YIPF1Q9Y548 306 aa11.13□□□□□ -0.63
PFDN1-203ENST00000510217 MTMR11A4FU01 709 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 OR6C75A6NL08 312 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 POLR2DO15514 142 aaKnown RBP11.12□□□□□ -0.63
PFDN1-203ENST00000510217 CYP11A1P05108 521 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 PAX3P23760 479 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 CASP1P29466 404 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 HOXD13P35453 343 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 CCR2P41597 374 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 TAF6P49848 677 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 EHHADHQ08426 723 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 MYBPC2Q14324 1141 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 RESP18Q5W5W9 173 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 ATL3Q6DD88 541 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 ARMCX5Q6P1M9 558 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 MTSS1LQ765P7 747 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 EPM2AIP1Q7L775 607 aaPredicted RBP11.12□□□□□ -0.63
PFDN1-203ENST00000510217 USP37Q86T82 979 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 NT5DC4Q86YG4 428 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 SYCP3Q8IZU3 236 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 TTC9BQ8N6N2 239 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 IQUBQ8NA54 791 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 FLCNQ8NFG4 579 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 OR10T2Q8NGX3 314 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 GPR152Q8TDT2 470 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 TCEAL4Q96EI5 215 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 FAM84AQ96KN4 292 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 PGLYRP2Q96PD5 576 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 PHOX2BQ99453 314 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 C7orf25Q9BPX7 421 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 RTP3Q9BQQ7 232 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 LRRC27Q9C0I9 530 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 DNAJC25Q9H1X3 360 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 PCIF1Q9H4Z3 704 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 TMEM206Q9H813 350 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 SLC2A4RGQ9NR83 387 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 RYDENQ9NUL5 291 aaKnown RBP11.12□□□□□ -0.63
PFDN1-203ENST00000510217 RBAKQ9NYW8 714 aaPredicted RBP11.12□□□□□ -0.63
PFDN1-203ENST00000510217 CEP72Q9P209 647 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 WNT16Q9UBV4 365 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 CA14Q9ULX7 337 aa11.12□□□□□ -0.63
PFDN1-203ENST00000510217 MRPS23Q9Y3D9 190 aaKnown RBP11.12□□□□□ -0.63
PFDN1-203ENST00000510217 GOLGA8IPA6NC78 632 aa11.11□□□□□ -0.63
PFDN1-203ENST00000510217 GOLGA8JA6NMD2 632 aa11.11□□□□□ -0.63
PFDN1-203ENST00000510217 EIF3DO15371 548 aaKnown RBP eCLIP11.11□□□□□ -0.63
PFDN1-203ENST00000510217 GALR2O43603 387 aaPredicted RBP11.11□□□□□ -0.63
PFDN1-203ENST00000510217 PI15O43692 258 aa11.11□□□□□ -0.63
PFDN1-203ENST00000510217 EXTL3O43909 919 aa11.11□□□□□ -0.63
PFDN1-203ENST00000510217 LDHAP00338 332 aaKnown RBP11.11□□□□□ -0.63
PFDN1-203ENST00000510217 PTPN2P17706 415 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms