RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 ZNF564Q8TBZ8 553 aaPredicted RBP13.31□□□□□ -0.28
PRDM16-205ENST00000509860 ZNF606Q8WXB4 792 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 NXF3Q9H4D5 531 aaKnown RBP13.31□□□□□ -0.28
PRDM16-205ENST00000509860 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 L1RE1Q9UN81 338 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 GRIN2DO15399 1336 aa13.31□□□□□ -0.28
PRDM16-205ENST00000509860 TMEM88BA6NKF7 163 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ADAMTS4O75173 837 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 GJA9P57773 515 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ZNF252P-AS1Q0IIN9 211 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 SNX17Q15036 470 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 SNX27Q96L92 541 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 FAM81BQ96LP2 452 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 VRTNQ9H8Y1 702 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 CYP3A5P20815 502 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 FLT3LGP49771 235 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 RAD23BP54727 409 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 BRD3Q15059 726 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 CFAP221Q4G0U5 840 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ZNF394Q53GI3 561 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 CCSAPQ6IQ19 270 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ARRDC4Q8NCT1 418 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 HERPUD2Q9BSE4 406 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 CTTNBP2NLQ9P2B4 639 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 TUBGCP4Q9UGJ1 667 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 TSC2P49815 1807 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 PGK1P00558 417 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 TMEM191BP0C7N4 346 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ECHS1P30084 290 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 CCND3P30281 292 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-205ENST00000509860 CACNB2Q08289 660 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ZNF211Q13398 564 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ANKS1BQ7Z6G8 1248 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 AP1M1Q9BXS5 423 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 ELOVL4Q9GZR5 314 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 RNF39Q9H2S5 420 aa13.3□□□□□ -0.28
PRDM16-205ENST00000509860 TTC7AQ9ULT0 858 aaPredicted RBP13.3□□□□□ -0.28
PRDM16-205ENST00000509860 TCRBV7S2A1N4TA0A589 114 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 IGFBP6P24592 240 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 SURF1Q15526 300 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 IFI16Q16666 785 aaKnown RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 PHF13Q86YI8 300 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 RNF186Q9NXI6 227 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 CNOT8Q9UFF9 292 aaKnown RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 DUSP11O75319 330 aaKnown RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 AKR1A1P14550 325 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 CDH5P33151 784 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 SIX1Q15475 284 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 GDF6Q6KF10 455 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 SYCE1Q8N0S2 351 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 KRT222Q8N1A0 295 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 SLC4A11Q8NBS3 891 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 C18orf25Q96B23 403 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 ANKRD36BP1Q96IX9 119 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 PBKQ96KB5 322 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 AMFRQ9UKV5 643 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 POLR2BP30876 1174 aaKnown RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 CTNNA1P35221 906 aaKnown RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 MAMLD1Q13495 774 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 AENQ8WTP8 325 aaKnown RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 CXorf56Q9H5V9 222 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 ASB7Q9H672 318 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 AVENQ9NQS1 362 aaPredicted RBP13.29□□□□□ -0.28
PRDM16-205ENST00000509860 RNF14Q9UBS8 474 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 GINS2Q9Y248 185 aa13.29□□□□□ -0.28
PRDM16-205ENST00000509860 THAP12O43422 761 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 RAD51CO43502 376 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 MESDQ14696 234 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 DENND1BQ6P3S1 775 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
PRDM16-205ENST00000509860 MMS22LQ6ZRQ5 1243 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
PRDM16-205ENST00000509860 TMEM110-MUSTN1A8MSY1 372 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 CEP104O60308 925 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 TCF4P15884 667 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 MMP8P22894 467 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 OGDHQ02218 1023 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 GDF3Q9NR23 364 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 NXF1Q9UBU9 619 aaKnown RBP13.28□□□□□ -0.28
PRDM16-205ENST00000509860 C2CD2Q9Y426 696 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 CILPO75339 1184 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 ERLIN2O94905 339 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 TNNC2P02585 160 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 PYGMP11217 842 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 TUBB4BP68371 445 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 TMEM132DQ14C87 1099 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 TMEM132AQ24JP5 1023 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 SLC27A1Q6PCB7 646 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 CXCL17Q6UXB2 119 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 FAM228AQ86W67 206 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 C1orf131Q8NDD1 294 aaKnown RBP13.28□□□□□ -0.28
PRDM16-205ENST00000509860 SMC1BQ8NDV3 1235 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 KRT12Q99456 494 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 C11orf70Q9BRQ4 267 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 CNTN3Q9P232 1028 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms