RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TPH2Q8IWU9 490 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 C3orf20Q8ND61 904 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 NLGN4YQ8NFZ3 816 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 RGMAQ96B86 450 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 METTL14Q9HCE5 456 aaKnown RBP8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 TRPM5Q9NZQ8 1165 aa8.66□□□□□ -1.02
TRAPPC11-206ENST00000509857 GAGE12BA1L429 117 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 GAGE12HA6NDE8 117 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 NT5C1B-RDH14C9J2C7 533 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 HAUS5O94927 633 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 ARIH2O95376 493 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 CD1AP06126 327 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 NR4A1P22736 598 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 GCSHP23434 173 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 SLC6A2P23975 617 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 SLC6A4P31645 630 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 HK3P52790 923 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 IFIT1BQ5T764 474 aaKnown RBP8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 FAM102BQ5T8I3 360 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 NXNQ6DKJ4 435 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 MED25Q71SY5 747 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 EPM2AIP1Q7L775 607 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 ZNF276Q8N554 614 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 PNISRQ8TF01 805 aaKnown RBP8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 SLC25A43Q8WUT9 341 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 VRK1Q99986 396 aaPredicted RBP8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 NMRK2Q9NPI5 230 aa8.65□□□□□ -1.02
TRAPPC11-206ENST00000509857 MROH2AA6NES4 1674 aa8.65□□□□□ -1.03
TRAPPC11-206ENST00000509857 KDM5AP29375 1690 aaKnown RBP8.65□□□□□ -1.03
TRAPPC11-206ENST00000509857 MARCH11A6NNE9 402 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 KIAA0391O15091 583 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 ZNF185O15231 689 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 SBK3P0C264 359 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 FTH1P19P0C7X4 201 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 HSPA6P17066 643 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 TACR2P21452 398 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 ZFP36P26651 326 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 FAM189BP81408 668 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 NOGQ13253 232 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 SNAPC2Q13487 334 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 LRRC41Q15345 812 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 PDCD4Q53EL6 469 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 FNDC7Q5VTL7 733 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 CYB5RLQ6IPT4 315 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 SLC4A10Q6U841 1118 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 B3GNT9Q6UX72 402 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 RHOUQ7L0Q8 258 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 CHPFQ8IZ52 775 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 OR56A1Q8NGH5 318 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 LENG9Q96B70 501 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 KRTAP4-9Q9BYQ8 210 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 ZNF768Q9H5H4 540 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 KLHL11Q9NVR0 708 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 SIDT1Q9NXL6 827 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 KLHL42Q9P2K6 505 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 G3BP2Q9UN86 482 aaKnown RBP8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 UGGT1Q9NYU2 1555 aa8.64□□□□□ -1.03
TRAPPC11-206ENST00000509857 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 LRRC14BA6NHZ5 514 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 TSPAN6O43657 245 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 SLC43A1O75387 559 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 RPS6KA4O75676 772 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 ITGB1P05556 798 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 SPATA31D3P0C874 917 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 U2AF1L5P0DN76 240 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 MAP2K6P52564 334 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 U2AF1Q01081 240 aaKnown RBP eCLIP8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 LSM12Q3MHD2 195 aaKnown RBP8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 LCE5AQ5TCM9 118 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 GGT6Q6P531 493 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 SPATA31D4Q6ZUB0 917 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 FITM2Q8N6M3 262 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 C1GALT1C1Q96EU7 318 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 FAM193BQ96PV7 902 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 TEX101Q9BY14 249 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 REXO4Q9GZR2 422 aaKnown RBP8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 GSTO2Q9H4Y5 243 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 KMT5AQ9NQR1 393 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 GPRC5BQ9NZH0 403 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 JKAMPQ9P055 326 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 TCEAL9Q9UHQ7 104 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 FZD1Q9UP38 647 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 USP15Q9Y4E8 981 aaPredicted RBP8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 ADGRB1O14514 1584 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 NEXMIFQ5QGS0 1516 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 YEATS2Q9ULM3 1422 aa8.63□□□□□ -1.03
TRAPPC11-206ENST00000509857 PREX1Q8TCU6 1659 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 F2RL2O00254 374 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 RNASET2O00584 256 aaKnown RBP8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 FTLP02792 175 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 IL12RB1P42701 662 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 ZNF267Q14586 743 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 CCDC184Q52MB2 194 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 LRRC55Q6ZSA7 311 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 TCEAL8Q8IYN2 117 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 Q8N1X5 172 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 NGEFQ8N5V2 710 aa8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 DIS3LQ8TF46 1054 aaKnown RBP8.62□□□□□ -1.03
TRAPPC11-206ENST00000509857 FAM167AQ96KS9 214 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms