RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ELAC1Q9H777 363 aaKnown RBP4.95□□□□□ -1.62
NIPBL-206ENST00000509429 NRDE2Q9H7Z3 1164 aa4.95□□□□□ -1.62
NIPBL-206ENST00000509429 IL1RAPL1Q9NZN1 696 aa4.95□□□□□ -1.62
NIPBL-206ENST00000509429 MARCH2Q9P0N8 246 aa4.95□□□□□ -1.62
NIPBL-206ENST00000509429 ZNF624Q9P2J8 865 aaPredicted RBP4.95□□□□□ -1.62
NIPBL-206ENST00000509429 RIMKLBQ9ULI2 386 aa4.95□□□□□ -1.62
NIPBL-206ENST00000509429 WASF3Q9UPY6 502 aa4.95□□□□□ -1.62
NIPBL-206ENST00000509429 PRELID1Q9Y255 219 aa4.95□□□□□ -1.62
NIPBL-206ENST00000509429 WDR37Q9Y2I8 494 aa4.95□□□□□ -1.62
NIPBL-206ENST00000509429 AK5Q9Y6K8 562 aa4.95□□□□□ -1.62
NIPBL-206ENST00000509429 LRRC9Q6ZRR7 1453 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 KDRP35968 1356 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 KANK1Q14678 1352 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 TRBV23OR9-2A0A075B6M9 112 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 CYP2D7A0A087X1C5 515 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 ABHD14A-ACY1A0A1B0GW23 586 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 GOLGA6L19H0YKK7 550 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 APAF1O14727 1248 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 XPOTO43592 962 aaKnown RBP4.94□□□□□ -1.62
NIPBL-206ENST00000509429 TIPRLO75663 272 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 CSPG5O95196 566 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 CD4P01730 458 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 STMN1P16949 149 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 PAMP19021 973 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 PBLDP30039 288 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-206ENST00000509429 RPS19P39019 145 aaKnown RBP4.94□□□□□ -1.62
NIPBL-206ENST00000509429 MPP1Q00013 466 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 FOXL1Q12952 345 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 DPYSQ14117 519 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 NEDD9Q14511 834 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 USP10Q14694 798 aaKnown RBP4.94□□□□□ -1.62
NIPBL-206ENST00000509429 SNAP47Q5SQN1 464 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 TTC39AQ5SRH9 613 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 NAIF1Q69YI7 327 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-206ENST00000509429 FCRLBQ6BAA4 426 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 LDHAL6AQ6ZMR3 332 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 PPP1R42Q7Z4L9 355 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 SLC9B2Q86UD5 537 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 SLITRK4Q8IW52 837 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 TEX11Q8IYF3 940 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 ZNF366Q8N895 744 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 GOLM1Q8NBJ4 401 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 IPMKQ8NFU5 416 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 TRIM58Q8NG06 486 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 CCHCR1Q8TD31 782 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 HOOK2Q96ED9 719 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 CEP295NLQ96MC4 621 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 SMAD5Q99717 465 aaKnown RBP4.94□□□□□ -1.62
NIPBL-206ENST00000509429 DPYSL5Q9BPU6 564 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 MCMBPQ9BTE3 642 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 PI4K2AQ9BTU6 479 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 NOL6Q9H6R4 1146 aaKnown RBP4.94□□□□□ -1.62
NIPBL-206ENST00000509429 VPS37BQ9H9H4 285 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 ABCF3Q9NUQ8 709 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 TUBA8Q9NY65 449 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-206ENST00000509429 ITGB1BP2Q9UKP3 347 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 GRID1Q9ULK0 1009 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 COG5Q9UP83 839 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 PLAAQ9Y263 795 aa4.94□□□□□ -1.62
NIPBL-206ENST00000509429 GCC2Q8IWJ2 1684 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 NPHP3-ACAD11A0A0J9YXS1 232 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 CCDC85CA6NKD9 419 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 H0Y626 953 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 TTI1O43156 1089 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 ZBTB43O43298 467 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 TSC22D2O75157 780 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 DAB1O75553 588 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 TGDSO95455 350 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 SSBP05455 408 aaKnown RBP eCLIP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 PHKG2P15735 406 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 PECAM1P16284 738 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 PSMA4P25789 261 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 NF2P35240 595 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 ECE1P42892 770 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 MAPK9P45984 424 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 GUCY2FP51841 1108 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 CCNHP51946 323 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 APOBRQ0VD83 1088 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 TCIRG1Q13488 830 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 BECN1Q14457 450 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 SMAD2Q15796 467 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 IMMTQ16891 758 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 SUPT20HL1Q3ZLR7 823 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 GPATCH4Q5T3I0 446 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 ANGPTL8Q6UXH0 198 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 ATF7IPQ6VMQ6 1270 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 GALNT13Q8IUC8 556 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 CCDC13Q8IYE1 715 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 CBARPQ8N350 705 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 TMEM57Q8N5G2 664 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 TRIML2Q8N7C3 387 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 C7orf31Q8N865 590 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 SMYD1Q8NB12 490 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 PPP1R14CQ8TAE6 165 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 HNRNPLLQ8WVV9 542 aaKnown RBP4.93□□□□□ -1.62
NIPBL-206ENST00000509429 MIEF2Q96C03 454 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 TNIP3Q96KP6 325 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 DNAJC7Q99615 494 aa4.93□□□□□ -1.62
NIPBL-206ENST00000509429 UQCC2Q9BRT2 126 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms