RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 PON2Q15165 354 aa17.43■□□□□ 0.38
CXCL1-202ENST00000509101 AASDHQ4L235 1098 aaPredicted RBP17.43■□□□□ 0.38
CXCL1-202ENST00000509101 DGKKQ5KSL6 1271 aa17.43■□□□□ 0.38
CXCL1-202ENST00000509101 ARID3BQ8IVW6 561 aaPredicted RBP17.43■□□□□ 0.38
CXCL1-202ENST00000509101 FOXP1Q9H334 677 aaPredicted RBP17.43■□□□□ 0.38
CXCL1-202ENST00000509101 GTSE1Q9NYZ3 720 aa17.43■□□□□ 0.38
CXCL1-202ENST00000509101 RBM19Q9Y4C8 960 aaKnown RBP17.43■□□□□ 0.38
CXCL1-202ENST00000509101 SFI1A8K8P3 1242 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 PP2D1A8MPX8 630 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 DPYSL4O14531 572 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 TOM1L1O75674 476 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 STRN3Q13033 797 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 GNL2Q13823 731 aaKnown RBP17.42■□□□□ 0.38
CXCL1-202ENST00000509101 ARHGAP29Q52LW3 1261 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 IL31Q6EBC2 164 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 RINT1Q6NUQ1 792 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 USP37Q86T82 979 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 RALGPS2Q86X27 583 aaPredicted RBP17.42■□□□□ 0.38
CXCL1-202ENST00000509101 TTC9BQ8N6N2 239 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 C4orf32Q8N8J7 132 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 LRRC3BQ96PB8 259 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 MKNK1Q9BUB5 465 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 ATXN3LQ9H3M9 355 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 DNM3Q9UQ16 869 aa17.42■□□□□ 0.38
CXCL1-202ENST00000509101 MTMR11A4FU01 709 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 FOXD2O60548 495 aaPredicted RBP17.41■□□□□ 0.38
CXCL1-202ENST00000509101 SOAT2O75908 522 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 OAZ2O95190 189 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 PRAMEF12O95522 483 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 LRPAP1P30533 357 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 MATR3P43243 847 aaKnown RBP eCLIP17.41■□□□□ 0.38
CXCL1-202ENST00000509101 ALDH1A3P47895 512 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 GUCY2FP51841 1108 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 NEK4P51957 841 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 RAD51AP2Q09MP3 1159 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 CCINQ13939 588 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 SF3A2Q15428 464 aaKnown RBP17.41■□□□□ 0.38
CXCL1-202ENST00000509101 CCDC6Q16204 474 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 GPR158Q5T848 1215 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 DSTYKQ6XUX3 929 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 GAREM2Q75VX8 874 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 KCNK18Q7Z418 384 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 HAUS6Q7Z4H7 955 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 WDR5BQ86VZ2 330 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 IGSF22Q8N9C0 903 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 DDX1Q92499 740 aaKnown RBP17.41■□□□□ 0.38
CXCL1-202ENST00000509101 KIF12Q96FN5 646 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 RAB34Q9BZG1 259 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 NOL7Q9UMY1 257 aaKnown RBP17.41■□□□□ 0.38
CXCL1-202ENST00000509101 SLC27A5Q9Y2P5 690 aa17.41■□□□□ 0.38
CXCL1-202ENST00000509101 KIAA1549LQ6ZVL6 1849 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 MYO16Q9Y6X6 1858 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 OR6C75A6NL08 312 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 AXIN1O15169 862 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 GABRR2P28476 465 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 AARSP49588 968 aaKnown RBP eCLIP17.4■□□□□ 0.38
CXCL1-202ENST00000509101 TNK2Q07912 1038 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 GPR17Q13304 367 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 CENPPQ6IPU0 288 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 C1orf186Q6ZWK4 172 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 CCDC83Q8IWF9 413 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 C12orf50Q8NA57 414 aaPredicted RBP17.4■□□□□ 0.38
CXCL1-202ENST00000509101 ATAD1Q8NBU5 361 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 PSMG2Q969U7 264 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 OXCT2Q9BYC2 517 aaPredicted RBP17.4■□□□□ 0.38
CXCL1-202ENST00000509101 ARRDC1-AS1Q9H2J1 176 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 C17orf75Q9HAS0 396 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 ANGPTL2Q9UKU9 493 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 STK24Q9Y6E0 443 aa17.4■□□□□ 0.38
CXCL1-202ENST00000509101 FRYQ5TBA9 3013 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 SCN1AP35498 2009 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 PPEF2O14830 753 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 CLDN3O15551 220 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 EXTL3O43909 919 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 CDC25AP30304 524 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 TNFSF9P41273 254 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 PXNP49023 591 aaPredicted RBP17.39■□□□□ 0.37
CXCL1-202ENST00000509101 CYP4F8P98187 520 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 MCL1Q07820 350 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 PDIA5Q14554 519 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 ARHGAP15Q53QZ3 475 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 OVOS1Q6IE37 1185 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 PKN3Q6P5Z2 889 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 DNAJB7Q7Z6W7 309 aaPredicted RBP17.39■□□□□ 0.37
CXCL1-202ENST00000509101 TMEM161BQ8NDZ6 487 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 TMEM209Q96SK2 561 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 HAPLN2Q9GZV7 340 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 UBQLN1Q9UMX0 589 aaKnown RBP17.39■□□□□ 0.37
CXCL1-202ENST00000509101 ASB3Q9Y575 518 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 LAMA1P25391 3075 aa17.39■□□□□ 0.37
CXCL1-202ENST00000509101 TTC26A0AVF1 554 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 FGF19O95750 216 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 MAPTP10636 758 aaKnown RBP17.38■□□□□ 0.37
CXCL1-202ENST00000509101 PLS3P13797 630 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 GUCY2CP25092 1073 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 HOXA6P31267 233 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 LIMK1P53667 647 aa17.38■□□□□ 0.37
CXCL1-202ENST00000509101 PPP2R3AQ06190 1150 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms