RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 TTC9BQ8N6N2 239 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 ZNF461Q8TAF7 563 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 SMG7Q92540 1137 aaKnown RBP19.6■□□□□ 0.73
CLDND1-220ENST00000508902 PRKD2Q9BZL6 878 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 C11orf16Q9NQ32 467 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 HCFC1R1Q9NWW0 138 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 MAN1B1Q9UKM7 699 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 ITGA11Q9UKX5 1188 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 L1RE1Q9UN81 338 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 NME7Q9Y5B8 376 aa19.6■□□□□ 0.73
CLDND1-220ENST00000508902 KPNA7A9QM74 516 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 H7C4K7 107 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 CYB561D2O14569 222 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 CCL16O15467 120 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 TMEM191BP0C7N4 346 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 ODC1P11926 461 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 CD44P16070 742 aaKnown RBP19.59■□□□□ 0.73
CLDND1-220ENST00000508902 PRCPP42785 496 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 TRAPPC11Q7Z392 1133 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 LIMS2Q7Z4I7 341 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 RNF135Q8IUD6 432 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 ELOA2Q8IYF1 753 aaPredicted RBP19.59■□□□□ 0.73
CLDND1-220ENST00000508902 CSGALNACT2Q8N6G5 542 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 LRRC52Q8N7C0 313 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 GOLGA5Q8TBA6 731 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 PARD3BQ8TEW8 1205 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 ELMO3Q96BJ8 720 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 RIPOR3Q96MK2 946 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 NECTIN4Q96NY8 510 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 MUTYHQ9UIF7 546 aa19.59■□□□□ 0.73
CLDND1-220ENST00000508902 CLUHO75153 1309 aa19.58■□□□□ 0.73
CLDND1-220ENST00000508902 ARHGEF37A1IGU5 675 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 AKAP3O75969 853 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 ATF2P15336 505 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 HOXA9P31269 272 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 CLDN10P78369 228 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 BFSP1Q12934 665 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 NFIL3Q16649 462 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 ATAT1Q5SQI0 421 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 TDRD10Q5VZ19 366 aaKnown RBP19.58■□□□□ 0.72
CLDND1-220ENST00000508902 ISM2Q6H9L7 571 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 CLEC17AQ6ZS10 378 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 LRRTM3Q86VH5 581 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 PDCL2Q8N4E4 241 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 GSDMAQ96QA5 445 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 MYADMQ96S97 322 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 WDR6Q9NNW5 1121 aaKnown RBP19.58■□□□□ 0.72
CLDND1-220ENST00000508902 PTPRDP23468 1912 aa19.58■□□□□ 0.72
CLDND1-220ENST00000508902 SPDYE4A6NLX3 237 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 VNN1O95497 513 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 KRT19P08727 400 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 ADCY1Q08828 1119 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 DUOXA2Q1HG44 320 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 SV2CQ496J9 727 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 COBLL1Q53SF7 1204 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 PPM1LQ5SGD2 360 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 LIN9Q5TKA1 542 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 ZNF658Q5TYW1 1059 aaPredicted RBP19.57■□□□□ 0.72
CLDND1-220ENST00000508902 TCEAL8Q8IYN2 117 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 CACTINQ8WUQ7 758 aaKnown RBP19.57■□□□□ 0.72
CLDND1-220ENST00000508902 KBTBD7Q8WVZ9 684 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 EEF2KMTQ96G04 330 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 ANKRD36BP1Q96IX9 119 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 ZNF560Q96MR9 790 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 PGLYRP2Q96PD5 576 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 XYLT2Q9H1B5 865 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 TMLHEQ9NVH6 421 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 GDAP2Q9NXN4 497 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 AFF4Q9UHB7 1163 aaKnown RBP19.57■□□□□ 0.72
CLDND1-220ENST00000508902 INSL5Q9Y5Q6 135 aa19.57■□□□□ 0.72
CLDND1-220ENST00000508902 MTMR11A4FU01 709 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 TRIM49BA6NDI0 452 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 KINO60870 393 aaKnown RBP19.56■□□□□ 0.72
CLDND1-220ENST00000508902 PRPF40AO75400 957 aaKnown RBP19.56■□□□□ 0.72
CLDND1-220ENST00000508902 C4BPAP04003 597 aaKnown RBP19.56■□□□□ 0.72
CLDND1-220ENST00000508902 POU2F2P09086 479 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 HNRNPA1P09651 372 aaKnown RBP eCLIP19.56■□□□□ 0.72
CLDND1-220ENST00000508902 NR2F2P24468 414 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 UBE2HP62256 183 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 RBP5P82980 135 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 MYBPC2Q14324 1141 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 SURF1Q15526 300 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 SOWAHAQ2M3V2 549 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 GRASPQ7Z6J2 395 aaPredicted RBP19.56■□□□□ 0.72
CLDND1-220ENST00000508902 ZC3H3Q8IXZ2 948 aaKnown RBP19.56■□□□□ 0.72
CLDND1-220ENST00000508902 SMARCE1Q969G3 411 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 PKMYT1Q99640 499 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 ZCWPW1Q9H0M4 648 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 DNAJC25Q9H1X3 360 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 SMOC2Q9H3U7 446 aa19.56■□□□□ 0.72
CLDND1-220ENST00000508902 DNMT3BQ9UBC3 853 aaKnown RBP19.56■□□□□ 0.72
CLDND1-220ENST00000508902 OR6C75A6NL08 312 aa19.55■□□□□ 0.72
CLDND1-220ENST00000508902 PI4K2BG5E9Z4 385 aa19.55■□□□□ 0.72
CLDND1-220ENST00000508902 CALUO43852 315 aaPredicted RBP19.55■□□□□ 0.72
CLDND1-220ENST00000508902 SOAT2O75908 522 aa19.55■□□□□ 0.72
CLDND1-220ENST00000508902 TNNC2P02585 160 aa19.55■□□□□ 0.72
CLDND1-220ENST00000508902 CPB1P15086 417 aa19.55■□□□□ 0.72
CLDND1-220ENST00000508902 TNNI1P19237 187 aa19.55■□□□□ 0.72
CLDND1-220ENST00000508902 PAX3P23760 479 aa19.55■□□□□ 0.72
CLDND1-220ENST00000508902 PNPLA4P41247 253 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms