RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 SPATA18Q8TC71 538 aa14.6□□□□□ -0.07
LINC02171-201ENST00000508619 C2orf15Q8WU43 125 aaKnown RBP14.6□□□□□ -0.07
LINC02171-201ENST00000508619 ELSPBP1Q96BH3 223 aa14.6□□□□□ -0.07
LINC02171-201ENST00000508619 ZNF512Q96ME7 567 aaPredicted RBP14.6□□□□□ -0.07
LINC02171-201ENST00000508619 ZNF560Q96MR9 790 aa14.6□□□□□ -0.07
LINC02171-201ENST00000508619 GPR88Q9GZN0 384 aa14.6□□□□□ -0.07
LINC02171-201ENST00000508619 TRPV4Q9HBA0 871 aa14.6□□□□□ -0.07
LINC02171-201ENST00000508619 DPP3Q9NY33 737 aa14.6□□□□□ -0.07
LINC02171-201ENST00000508619 CFAP45Q9UL16 551 aa14.6□□□□□ -0.07
LINC02171-201ENST00000508619 YIPF1Q9Y548 306 aa14.6□□□□□ -0.07
LINC02171-201ENST00000508619 EXTL3O43909 919 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 VNN2O95498 520 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 SNRPFP62306 86 aaKnown RBP14.59□□□□□ -0.07
LINC02171-201ENST00000508619 TWF1Q12792 350 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 SV2CQ496J9 727 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 CENPPQ6IPU0 288 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 ARMCX5Q6P1M9 558 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 SHC4Q6S5L8 630 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 ALYREFQ86V81 257 aaKnown RBP14.59□□□□□ -0.07
LINC02171-201ENST00000508619 SYCP3Q8IZU3 236 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 LRRC52Q8N7C0 313 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 CACTINQ8WUQ7 758 aaKnown RBP14.59□□□□□ -0.07
LINC02171-201ENST00000508619 BORCS6Q96GS4 357 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 C7orf25Q9BPX7 421 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 CORO1BQ9BR76 489 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 DDX23Q9BUQ8 820 aaKnown RBP14.59□□□□□ -0.07
LINC02171-201ENST00000508619 PANK2Q9BZ23 570 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 OSBPL6Q9BZF3 934 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 TBC1D17Q9HA65 648 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 RBAKQ9NYW8 714 aaPredicted RBP14.59□□□□□ -0.07
LINC02171-201ENST00000508619 CEP72Q9P209 647 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 TFIP11Q9UBB9 837 aaKnown RBP14.59□□□□□ -0.07
LINC02171-201ENST00000508619 TIMM13Q9Y5L4 95 aaPredicted RBP14.59□□□□□ -0.07
LINC02171-201ENST00000508619 UBE4BO95155 1302 aa14.59□□□□□ -0.07
LINC02171-201ENST00000508619 TSC2P49815 1807 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 MTMR11A4FU01 709 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 FGF19O95750 216 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 CEBPBP17676 345 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 EPHB3P54753 998 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 GPC5P78333 572 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 EHHADHQ08426 723 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 SURF1Q15526 300 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 METTL23Q86XA0 190 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 DTWD2Q8NBA8 298 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 DNASE1L2Q92874 299 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 FAM213AQ9BRX8 229 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 RPP25Q9BUL9 199 aaKnown RBP14.58□□□□□ -0.08
LINC02171-201ENST00000508619 ZCWPW1Q9H0M4 648 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 KIAA1586Q9HCI6 787 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 TRPV5Q9NQA5 729 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 TBC1D7Q9P0N9 293 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 ITGA11Q9UKX5 1188 aa14.58□□□□□ -0.08
LINC02171-201ENST00000508619 USP34Q70CQ2 3546 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 KPNA7A9QM74 516 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 CYB561D2O14569 222 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 PI15O43692 258 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 FCARP24071 287 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 NBL1P41271 181 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 CCR2P41597 374 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 MAGEA9P43362 315 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 ALDH1A3P47895 512 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 TUFMP49411 452 aaKnown RBP14.57□□□□□ -0.08
LINC02171-201ENST00000508619 DUSP4Q13115 394 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 MLF2Q15773 248 aaPredicted RBP14.57□□□□□ -0.08
LINC02171-201ENST00000508619 UNC13DQ70J99 1090 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 EPM2AIP1Q7L775 607 aaPredicted RBP14.57□□□□□ -0.08
LINC02171-201ENST00000508619 TMC8Q8IU68 726 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 THEM5Q8N1Q8 247 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 GPD1LQ8N335 351 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 TMEM130Q8N3G9 435 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 C1orf127Q8N9H9 656 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 OR10T2Q8NGX3 314 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 CXorf38Q8TB03 319 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 ZNF507Q8TCN5 953 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 DEPDC1BQ8WUY9 529 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 ING5Q8WYH8 240 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 ATOH1Q92858 354 aaPredicted RBP14.57□□□□□ -0.08
LINC02171-201ENST00000508619 PSMG2Q969U7 264 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 E2F7Q96AV8 911 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 DHX58Q96C10 678 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 ASB16Q96NS5 453 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 CBWD1Q9BRT8 395 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 LRRC3Q9BY71 257 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 FGFBP2Q9BYJ0 223 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 DNAJC25Q9H1X3 360 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 IKZF4Q9H2S9 585 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 ZFP14Q9HCL3 533 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 GDAP2Q9NXN4 497 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 DLGAP2Q9P1A6 1054 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 CGNQ9P2M7 1197 aaKnown RBP14.57□□□□□ -0.08
LINC02171-201ENST00000508619 RCOR1Q9UKL0 485 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 CA14Q9ULX7 337 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 GVINP1Q7Z2Y8 2422 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 VPS13AQ96RL7 3174 aa14.57□□□□□ -0.08
LINC02171-201ENST00000508619 PVALEFA0A1B0GWK0 134 aa14.56□□□□□ -0.08
LINC02171-201ENST00000508619 H0Y858 1186 aa14.56□□□□□ -0.08
LINC02171-201ENST00000508619 MOSPD3O75425 235 aa14.56□□□□□ -0.08
LINC02171-201ENST00000508619 PRPF6O94906 941 aaKnown RBP14.56□□□□□ -0.08
LINC02171-201ENST00000508619 RFX1P22670 979 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms