RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ATXN2LQ8WWM7 1075 aaKnown RBP9.83□□□□□ -0.84
NUP54-207ENST00000508583 KLHL5Q96PQ7 755 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 PLEKHA4Q9H4M7 779 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 UBE2ZQ9H832 354 aaPredicted RBP9.83□□□□□ -0.84
NUP54-207ENST00000508583 GDAP2Q9NXN4 497 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 MAGEC2Q9UBF1 373 aaPredicted RBP9.83□□□□□ -0.84
NUP54-207ENST00000508583 PCDHGC5Q9Y5F6 944 aa9.83□□□□□ -0.84
NUP54-207ENST00000508583 TRIM49BA6NDI0 452 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 I3L4J1 428 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 PER2O15055 1255 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 CLASP2O75122 1294 aaKnown RBP9.82□□□□□ -0.84
NUP54-207ENST00000508583 PCSK1P29120 753 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 LHX1P48742 406 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 MXI1P50539 228 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 CLCN4P51793 760 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 PMS1P54277 932 aaKnown RBP9.82□□□□□ -0.84
NUP54-207ENST00000508583 WNT7BP56706 349 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 MCCD1P59942 119 aaPredicted RBP9.82□□□□□ -0.84
NUP54-207ENST00000508583 MYL7Q01449 175 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 ADAM15Q13444 863 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 NCOA4Q13772 614 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 RAB33AQ14088 237 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 SGSM1Q2NKQ1 1148 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 ZNF699Q32M78 642 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 DPCR1Q3MIW9 517 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 ZACNQ401N2 412 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 DCAF17Q5H9S7 520 aaPredicted RBP9.82□□□□□ -0.84
NUP54-207ENST00000508583 LIN9Q5TKA1 542 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 TPGS2Q68CL5 300 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 LMBRD2Q68DH5 695 aaPredicted RBP9.82□□□□□ -0.84
NUP54-207ENST00000508583 KRT39Q6A163 491 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 SLC8B1Q6J4K2 584 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 CES5AQ6NT32 575 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 CAVIN1Q6NZI2 390 aaKnown RBP9.82□□□□□ -0.84
NUP54-207ENST00000508583 CD300LGQ6UXG3 332 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 CYP26C1Q6V0L0 522 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 CCDC149Q6ZUS6 474 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 TAS1R1Q7RTX1 841 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 ADGRD2Q7Z7M1 963 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 AUTS2Q8WXX7 1259 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 FAXDC2Q96IV6 333 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 B3GALT6Q96L58 329 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 POP1Q99575 1024 aaKnown RBP9.82□□□□□ -0.84
NUP54-207ENST00000508583 FAM124BQ9H5Z6 455 aaPredicted RBP9.82□□□□□ -0.84
NUP54-207ENST00000508583 VRTNQ9H8Y1 702 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 SFXN1Q9H9B4 322 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 TMEM8AQ9HCN3 771 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 SIX4Q9UIU6 781 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 SNX9Q9Y5X1 595 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 HCFC2Q9Y5Z7 792 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 SCN1AP35498 2009 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 VWA8A3KMH1 1905 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 PTPRJQ12913 1337 aa9.82□□□□□ -0.84
NUP54-207ENST00000508583 UNC80Q8N2C7 3258 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 BRWD1Q9NSI6 2320 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 P4HA2O15460 535 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 C4BPAP04003 597 aaKnown RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 TPM2P07951 284 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 CPB1P15086 417 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 KCNA5P22460 613 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 ELF1P32519 619 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 MARSP56192 900 aaKnown RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 STX17P56962 302 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 MRPS5P82675 430 aaKnown RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 TSPY1Q01534 308 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 ITIH3Q06033 890 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 MRPL58Q14197 206 aaKnown RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 UVSSAQ2YD98 709 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 WDR72Q3MJ13 1102 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 LEXMQ3ZCV2 418 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 ZNF667Q5HYK9 610 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 WDR44Q5JSH3 913 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 TDRD10Q5VZ19 366 aaKnown RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 LLGL2Q6P1M3 1020 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 PRSS55Q6UWB4 352 aaPredicted RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 SV2AQ7L0J3 742 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 TTC39CQ8N584 583 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 FBXL13Q8NEE6 735 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 ANKRD20A12PQ8NF67 263 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 ZNF461Q8TAF7 563 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 CXorf38Q8TB03 319 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 C2orf15Q8WU43 125 aaKnown RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 EEF2KMTQ96G04 330 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 BORCS6Q96GS4 357 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 MMS19Q96T76 1030 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 DUSP9Q99956 384 aaKnown RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 SRRTQ9BXP5 876 aaKnown RBP9.81□□□□□ -0.84
NUP54-207ENST00000508583 THAP9Q9H5L6 903 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 PRDM6Q9NQX0 595 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 ZDHHC7Q9NXF8 308 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 CD207Q9UJ71 328 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.81□□□□□ -0.84
NUP54-207ENST00000508583 CDY1Q9Y6F8 540 aa9.81□□□□□ -0.84
NUP54-207ENST00000508583 PPEF2O14830 753 aa9.8□□□□□ -0.84
NUP54-207ENST00000508583 SPTLC1O15269 473 aa9.8□□□□□ -0.84
NUP54-207ENST00000508583 PMM2O15305 246 aa9.8□□□□□ -0.84
NUP54-207ENST00000508583 TACC1O75410 805 aa9.8□□□□□ -0.84
NUP54-207ENST00000508583 CAVIN2O95810 425 aa9.8□□□□□ -0.84
NUP54-207ENST00000508583 HNRNPA1P09651 372 aaKnown RBP eCLIP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms