RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RPA1P27694 616 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 HOXC13P31276 330 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 SOX9P48436 509 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 ARHGAP29Q52LW3 1261 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 PLA2G2CQ5R387 149 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 TCEAL6Q6IPX3 200 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 CACNA2D4Q7Z3S7 1137 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 TMC8Q8IU68 726 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 LURAP1LQ8IV03 231 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 CEP120Q8N960 986 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 APPL2Q8NEU8 664 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 FAM200AQ8TCP9 573 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 KIFAP3Q92845 792 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 TCEAL3Q969E4 200 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 ZMAT2Q96NC0 199 aaKnown RBP10.28□□□□□ -0.76
NEDD9-211ENST00000508546 KIFC3Q9BVG8 833 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 CDT1Q9H211 546 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 SLITRK6Q9H5Y7 841 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 PTPRHQ9HD43 1115 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 CACNA2D2Q9NY47 1150 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 OBP2AQ9NY56 170 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 ORC3Q9UBD5 711 aaPredicted RBP10.28□□□□□ -0.76
NEDD9-211ENST00000508546 YIPF1Q9Y548 306 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 PI4KAP42356 2102 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 THADAQ6YHU6 1953 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 KIAA1549LQ6ZVL6 1849 aa10.28□□□□□ -0.76
NEDD9-211ENST00000508546 OBSL1O75147 1896 aa10.27□□□□□ -0.76
NEDD9-211ENST00000508546 ASCC3Q8N3C0 2202 aaKnown RBP10.27□□□□□ -0.76
NEDD9-211ENST00000508546 A0A1W2PRU2 124 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 RPP40O75818 363 aaKnown RBP10.27□□□□□ -0.77
NEDD9-211ENST00000508546 AKAP3O75969 853 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 CTDNEP1O95476 244 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 CPB1P15086 417 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 PLD1Q13393 1074 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 PON2Q15165 354 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 COL28A1Q2UY09 1125 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 RNF43Q68DV7 783 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 RNF19BQ6ZMZ0 732 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 HAUS6Q7Z4H7 955 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 PROSER1Q86XN7 944 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 ARID3BQ8IVW6 561 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-211ENST00000508546 DDX12PQ92771 950 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 ZC3H10Q96K80 434 aaKnown RBP10.27□□□□□ -0.77
NEDD9-211ENST00000508546 TBC1D32Q96NH3 1257 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 ACAP3Q96P50 834 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 ACO2Q99798 780 aaKnown RBP10.27□□□□□ -0.77
NEDD9-211ENST00000508546 MKNK1Q9BUB5 465 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 OXCT2Q9BYC2 517 aaPredicted RBP10.27□□□□□ -0.77
NEDD9-211ENST00000508546 TMEM60Q9H2L4 133 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 TMEM134Q9H6X4 195 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 PDRG1Q9NUG6 133 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 GTSE1Q9NYZ3 720 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 CNTN3Q9P232 1028 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 ANKFY1Q9P2R3 1169 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 DACH1Q9UI36 760 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 TPCN1Q9ULQ1 816 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 HECTD1Q9ULT8 2610 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 PHLPP2Q6ZVD8 1323 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 CACNA1EQ15878 2313 aa10.27□□□□□ -0.77
NEDD9-211ENST00000508546 APC2O95996 2303 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 BTBD18B2RXH4 712 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 HYAL3O43820 417 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-211ENST00000508546 OAZ2O95190 189 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 VNN2O95498 520 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 MCF2P10911 925 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 FDPSP14324 419 aaKnown RBP10.26□□□□□ -0.77
NEDD9-211ENST00000508546 PROZP22891 400 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 WEE1P30291 646 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 MCM4P33991 863 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 PLCB2Q00722 1185 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 ZNF568Q3ZCX4 644 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 SH3PXD2AQ5TCZ1 1133 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 KBTBD6Q86V97 674 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 ERMNQ8TAM6 284 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 C18orf25Q96B23 403 aaPredicted RBP10.26□□□□□ -0.77
NEDD9-211ENST00000508546 LRRC3BQ96PB8 259 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 DNAJC25Q9H1X3 360 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 KLK13Q9UKR3 277 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 ASB3Q9Y575 518 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 TCHHQ07283 1943 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 TSC2P49815 1807 aa10.26□□□□□ -0.77
NEDD9-211ENST00000508546 M0QZQ0 153 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 DPYSL4O14531 572 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 ABLIM1O14639 778 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 EXTL3O43909 919 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 DTNBO60941 627 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 FGF19O95750 216 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 MARCKSP29966 332 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-211ENST00000508546 MPLP40238 635 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 EPHB3P54753 998 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 OSTNP61366 133 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 YWHAHQ04917 246 aaPredicted RBP10.25□□□□□ -0.77
NEDD9-211ENST00000508546 GPR17Q13304 367 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 STXBP5Q5T5C0 1151 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 GAREM2Q75VX8 874 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 DIS3L2Q8IYB7 885 aaKnown RBP10.25□□□□□ -0.77
NEDD9-211ENST00000508546 CAMKK1Q8N5S9 505 aa10.25□□□□□ -0.77
NEDD9-211ENST00000508546 BPIFB1Q8TDL5 484 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms