RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 LPOP22079 712 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 SMARCA1P28370 1054 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 PIK3CGP48736 1102 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 RARRES1P49788 294 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 MAP2K6P52564 334 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 MRPS35P82673 323 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 FPGSQ05932 587 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 ZNF362Q5T0B9 420 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 THEMIS2Q5TEJ8 643 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 VWA1Q6PCB0 445 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 HEATR3Q7Z4Q2 680 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 FAM98AQ8NCA5 519 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 ACTRT2Q8TDY3 377 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 LPIN2Q92539 896 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 HOOK2Q96ED9 719 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 TRIB1Q96RU8 372 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 GPR35Q9HC97 309 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 GNL3LQ9NVN8 582 aaKnown RBP6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 LRIT1Q9P2V4 623 aa6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.86□□□□□ -1.31
TOPBP1-206ENST00000508524 hCG_2014768A0A024R1R8 64 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 TOR1BO14657 336 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 ABLIM3O94929 683 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 MATN4O95460 622 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 FTLP02792 175 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 GNAI3P08754 354 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 PSMC1P62191 440 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 GNAI1P63096 354 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 PGS1Q32NB8 556 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 SLC30A5Q8TAD4 765 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 NTN5Q8WTR8 489 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 SNX19Q92543 992 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 NUP88Q99567 741 aaPredicted RBP6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 WDCPQ9H6R7 721 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 MRPS18AQ9NVS2 196 aaKnown RBP6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 ETAA1Q9NY74 926 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 CFAP97Q9P2B7 532 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 ABCF2Q9UG63 623 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 TLK1Q9UKI8 766 aa6.85□□□□□ -1.31
TOPBP1-206ENST00000508524 E7ENX8 843 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 YY2O15391 372 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 PEX1O43933 1283 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 AKAP5P24588 427 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 FOLR3P41439 243 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 ZNF135P52742 658 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 TAP2Q03519 686 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 HLXQ14774 488 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 KIF22Q14807 665 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 PREPLQ4J6C6 727 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 MICALCLQ6ZW33 695 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 POC1BQ8TC44 478 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 SMOQ99835 787 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 MRPL46Q9H2W6 279 aaKnown RBP6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 SLAMF7Q9NQ25 335 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 AASDHPPTQ9NRN7 309 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 IP6K2Q9UHH9 426 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 FEZ2Q9UHY8 353 aaPredicted RBP6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 AGAP1Q9UPQ3 857 aa6.84□□□□□ -1.31
TOPBP1-206ENST00000508524 POLRMTO00411 1230 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 ALDH1L1O75891 902 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 CHEK2O96017 543 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 PF4V1P10720 104 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 RARBP10826 455 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 TYRP14679 529 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 FBLP22087 321 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 PHKA1P46020 1223 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 ANAPC15P60006 121 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 TCF15Q12870 199 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 HABP2Q14520 560 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 DPY19L2P1Q6NXN4 242 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 FBXO42Q6P3S6 717 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 PPP1R3BQ86XI6 285 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 MYCBPAPQ8TBZ2 947 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 CAGE1Q8TC20 777 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 FBXO41Q8TF61 875 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 MVB12AQ96EY5 273 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 ZNF764Q96H86 408 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 DUSP26Q9BV47 211 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 LMBRD1Q9NUN5 540 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 DDX56Q9NY93 547 aaKnown RBP6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 COX11Q9Y6N1 276 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 CCDC180Q9P1Z9 1646 aa6.83□□□□□ -1.32
TOPBP1-206ENST00000508524 ARHGEF17Q96PE2 2063 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 PDGFRBP09619 1106 aa6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 PPP3CBP16298 524 aa6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 HNRNPMP52272 730 aaKnown RBP eCLIP6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 MCL1Q07820 350 aa6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 TTF1Q15361 905 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 TSHZ1Q6ZSZ6 1077 aa6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 RD3Q7Z3Z2 195 aa6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 TNPO1Q92973 898 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 HPS3Q969F9 1004 aa6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 ZDHHC8Q9ULC8 765 aa6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 ANKRD6Q9Y2G4 727 aa6.82□□□□□ -1.32
TOPBP1-206ENST00000508524 COL11A2P13942 1736 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 MPPED1O15442 326 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 VCAM1P19320 739 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 NPTX2P47972 431 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 CACNA2D1P54289 1103 aa6.81□□□□□ -1.32
TOPBP1-206ENST00000508524 SLC30A10Q6XR72 485 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms