RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 IGKV6D-41A0A0C4DH26 115 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 CDC14BO60729 498 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 DDAH1O94760 285 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 TFRCP02786 760 aaKnown RBP5.33□□□□□ -1.56
NUP54-206ENST00000508465 ZNF888P0CJ79 500 aaPredicted RBP5.33□□□□□ -1.56
NUP54-206ENST00000508465 MAPK4P31152 587 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 DGCR2P98153 550 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 TMEM132BQ14DG7 1078 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 CD276Q5ZPR3 534 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 LARP1BQ659C4 914 aaKnown RBP5.33□□□□□ -1.56
NUP54-206ENST00000508465 LBX2Q6XYB7 198 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 Q6ZSN1 163 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 RASGRP2Q7LDG7 609 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 GPR142Q7Z601 462 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 NT5DC4Q86YG4 428 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 RBM12BQ8IXT5 1001 aaKnown RBP5.33□□□□□ -1.56
NUP54-206ENST00000508465 C1orf159Q96HA4 380 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 SCYL1Q96KG9 808 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 DEFB118Q96PH6 123 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 TACO1Q9BSH4 297 aaKnown RBP5.33□□□□□ -1.56
NUP54-206ENST00000508465 IL25Q9H293 177 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 SH2D4AQ9H788 454 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 ACTR10Q9NZ32 417 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 FLRT1Q9NZU1 646 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 NYAP2Q9P242 653 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.33□□□□□ -1.56
NUP54-206ENST00000508465 SLC30A1Q9Y6M5 507 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 DOCK3Q8IZD9 2030 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 PTPRFP10586 1907 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 MYH7P12883 1935 aa5.33□□□□□ -1.56
NUP54-206ENST00000508465 NAV1Q8NEY1 1877 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 LAMB1P07942 1786 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 DDX60LQ5H9U9 1706 aaKnown RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 SLC15A5A6NIM6 579 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 TSPY2A6NKD2 308 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 ZNF839A8K0R7 811 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 VWA5AO00534 786 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 ZNF213O14771 459 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 WDR46O15213 610 aaKnown RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 TTLL1O95922 423 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 PGK2P07205 417 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 ADH4P08319 380 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 GNAT1P11488 350 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 VAMP1P23763 118 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 CHMLP26374 656 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 SLC16A2P36021 539 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 RPS19P39019 145 aaKnown RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 NANOS3P60323 173 aaKnown RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 UBXN2AP68543 259 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 CCNA1P78396 465 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 MAP4K2Q12851 820 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 IKQ13123 557 aaPredicted RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 PRAMEF19Q5SWL8 479 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 MAMDC4Q6UXC1 1216 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 RSPO2Q6UXX9 243 aaPredicted RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 MFSD6Q6ZSS7 791 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 KCTD1Q719H9 257 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 DPP9Q86TI2 863 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 TBC1D10CQ8IV04 446 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 CPXCR1Q8N123 301 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 UHMK1Q8TAS1 419 aaKnown RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 TRIB2Q92519 343 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 LPAR1Q92633 364 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 USP6NLQ92738 828 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 MKL1Q969V6 931 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 OR14A2Q96R54 314 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 SPATC1LQ9H0A9 340 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 C12orf65Q9H3J6 166 aaKnown RBP5.32□□□□□ -1.56
NUP54-206ENST00000508465 ZNF287Q9HBT7 754 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 ANAPC4Q9UJX5 808 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 STX8Q9UNK0 236 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 NR2E1Q9Y466 385 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 RIPK3Q9Y572 518 aa5.32□□□□□ -1.56
NUP54-206ENST00000508465 ROBO3Q96MS0 1386 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 ESYT3A0FGR9 886 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 B4E1Z4 1266 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 HIP1O00291 1037 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 ORC4O43929 436 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 ZBED4O75132 1171 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 SGPL1O95470 568 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 RECKO95980 971 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 IL18BPO95998 194 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 GJB1P08034 283 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 C1SP09871 688 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 COL6A2P12110 1019 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 ZKSCAN1P17029 563 aaPredicted RBP5.31□□□□□ -1.56
NUP54-206ENST00000508465 MAKP20794 623 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 ACRV1P26436 265 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 ADORA2AP29274 412 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 CNGA1P29973 690 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 CCND3P30281 292 aaPredicted RBP5.31□□□□□ -1.56
NUP54-206ENST00000508465 CYP2C19P33261 490 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 STAT3P40763 770 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 RGS2P41220 211 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 TUBA3CQ13748 450 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 AKNAD1Q5T1N1 836 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 ANO1Q5XXA6 986 aa5.31□□□□□ -1.56
NUP54-206ENST00000508465 TUBA3EQ6PEY2 450 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms