RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ATXN2LQ8WWM7 1075 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 LZICQ8WZA0 190 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 HERVK_113Q902F9 699 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SH3KBP1Q96B97 665 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TRIM62Q9BVG3 475 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TIPINQ9BVW5 301 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 LSM14BQ9BX40 385 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 POLMQ9NP87 494 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 MORF4L1Q9UBU8 362 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 WDR19Q8NEZ3 1342 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 LTBP1Q14766 1721 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TCRBV5S4A2TA0A5A2 114 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 IKBKBO14920 756 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PDGFRBP09619 1106 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PTPN2P17706 415 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 MRE11P49959 708 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PSMD5Q16401 504 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 STX1AQ16623 288 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SLC39A12Q504Y0 691 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 GPR158Q5T848 1215 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 ARMCX6Q7L4S7 300 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SH3BP5LQ7L8J4 393 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 JAMLQ86YT9 394 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 RSAD2Q8WXG1 361 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 HIC2Q96JB3 615 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 EPB41L4AQ9HCS5 686 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TLR8Q9NR97 1041 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 DUS2Q9NX74 493 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SAMD15Q9P1V8 674 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 LIMD1Q9UGP4 676 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 MYADML2A6NDP7 307 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 CLIC2O15247 247 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 POLR2DO15514 142 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SGSM2O43147 1006 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 B3GAT3O94766 335 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 F13A1P00488 732 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SYPP08247 313 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 WEE2P0C1S8 567 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 ABCB4P21439 1286 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PMLP29590 882 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 GSDMDP57764 484 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 KDSRQ06136 332 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SEPT6Q14141 434 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PHKG1Q16816 387 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 EPC2Q52LR7 807 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 DAB2IPQ5VWQ8 1189 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TATDN1Q6P1N9 297 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 LRRC31Q6UY01 552 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TMCO2Q7Z6W1 182 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 FAM124AQ86V42 546 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 MAP7D3Q8IWC1 876 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TRIM48Q8IWZ4 208 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 EFHBQ8N7U6 833 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PDCD6IPQ8WUM4 868 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 FBXO32Q969P5 355 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 NSRP1Q9H0G5 558 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 METTL5Q9NRN9 209 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 ADGRA3Q8IWK6 1321 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 NUMA1Q14980 2115 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 COL2A1P02458 1487 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 FOCADQ5VW36 1801 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 NPHP3-ACAD11A0A0J9YXS1 232 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 FRMD3A2A2Y4 597 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TBC1D3BA6NDS4 549 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 H3BQ06 376 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TBX3O15119 743 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 DDHD2O94830 711 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PCDH8O95206 1070 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 ASMTLO95671 621 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 CKMP06732 381 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 GDI1P31150 447 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 LONP1P36776 959 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PBX2P40425 430 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 CASP7P55210 303 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 UBXN1Q04323 297 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 FAAP100Q0VG06 881 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 USP4Q13107 963 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 GTF2H3Q13889 308 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 ARHGAP44Q17R89 818 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 TMC5Q6UXY8 1006 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 MICALCLQ6ZW33 695 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SZRD1Q7Z422 152 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 ATP8B4Q8TF62 1192 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 ALKBH8Q96BT7 664 aaKnown RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 FAM163AQ96GL9 167 aaPredicted RBP3.13□□□□□ -1.91
NEDD4-208ENST00000508342 NECTIN4Q96NY8 510 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 DCBLD2Q96PD2 775 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 SLITRK1Q96PX8 696 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 LMAN2LQ9H0V9 348 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 ABCG4Q9H172 646 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 RABEP2Q9H5N1 569 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 PRDM4Q9UKN5 801 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 AK5Q9Y6K8 562 aa3.13□□□□□ -1.91
NEDD4-208ENST00000508342 KNTC1P50748 2209 aa3.12□□□□□ -1.91
NEDD4-208ENST00000508342 SOWAHBA6NEL2 793 aa3.12□□□□□ -1.91
NEDD4-208ENST00000508342 NDUFB5O43674 189 aa3.12□□□□□ -1.91
NEDD4-208ENST00000508342 GJB5O95377 273 aa3.12□□□□□ -1.91
NEDD4-208ENST00000508342 GNA14O95837 355 aa3.12□□□□□ -1.91
NEDD4-208ENST00000508342 UBA1P22314 1058 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms