RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 ASAP2O43150 1006 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 CCNT1O60563 726 aaKnown RBP9.8□□□□□ -0.84
COPS4-205ENST00000507376 EGFP01133 1207 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 ATF2P15336 505 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 BCKDHBP21953 392 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 FOSBP53539 338 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 CREB5Q02930 508 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 PDE4CQ08493 712 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 FCHO2Q0JRZ9 810 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 ELAVL2Q12926 359 aaKnown RBP9.8□□□□□ -0.84
COPS4-205ENST00000507376 LRRC32Q14392 662 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 PPP2R5DQ14738 602 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 NT5DC1Q5TFE4 455 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 TRIM68Q6AZZ1 485 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 MOXD1Q6UVY6 613 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 GAREM2Q75VX8 874 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 METTL3Q86U44 580 aaKnown RBP9.8□□□□□ -0.84
COPS4-205ENST00000507376 CSGALNACT1Q8TDX6 532 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 DEPDC1BQ8WUY9 529 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 DDX1Q92499 740 aaKnown RBP9.8□□□□□ -0.84
COPS4-205ENST00000507376 BBC3Q96PG8 261 aaPredicted RBP9.8□□□□□ -0.84
COPS4-205ENST00000507376 TMEM209Q96SK2 561 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 IER2Q9BTL4 223 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 NFKBIZQ9BYH8 718 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 DUSP15Q9H1R2 295 aaPredicted RBP9.8□□□□□ -0.84
COPS4-205ENST00000507376 FZD8Q9H461 694 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 ZSWIM4Q9H7M6 989 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 TRPV5Q9NQA5 729 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 TUBGCP4Q9UGJ1 667 aa9.8□□□□□ -0.84
COPS4-205ENST00000507376 TIMM13Q9Y5L4 95 aaPredicted RBP9.8□□□□□ -0.84
COPS4-205ENST00000507376 ATXN2Q99700 1313 aaKnown RBP9.8□□□□□ -0.84
COPS4-205ENST00000507376 APC2O95996 2303 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 SMIM28A0A1B0GU29 152 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 SPAARA0A1B0GVQ0 90 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 PODXLO00592 558 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 DGAT1O75907 488 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 RPS6KB1P23443 525 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 EPHA5P54756 1037 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 NR5A1Q13285 461 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 PRPF4BQ13523 1007 aaKnown RBP9.79□□□□□ -0.84
COPS4-205ENST00000507376 TSGA10IPQ3SY00 556 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 CTXN3Q4LDR2 81 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 SEZ6Q53EL9 994 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 SOWAHCQ53LP3 525 aaPredicted RBP9.79□□□□□ -0.84
COPS4-205ENST00000507376 RNF20Q5VTR2 975 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 ANKS3Q6ZW76 656 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 CACNA2D4Q7Z3S7 1137 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 NEK8Q86SG6 692 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 ARID3BQ8IVW6 561 aaPredicted RBP9.79□□□□□ -0.84
COPS4-205ENST00000507376 YTHDC1Q96MU7 727 aaKnown RBP9.79□□□□□ -0.84
COPS4-205ENST00000507376 HSD17B14Q9BPX1 270 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 AGXT2Q9BYV1 514 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 TPSD1Q9BZJ3 242 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 TRPV4Q9HBA0 871 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 HPS4Q9NQG7 708 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 SH3GLB2Q9NR46 395 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 ASAH2Q9NR71 780 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 PRMT7Q9NVM4 692 aaPredicted RBP9.79□□□□□ -0.84
COPS4-205ENST00000507376 GON4LQ3T8J9 2241 aa9.79□□□□□ -0.84
COPS4-205ENST00000507376 HELZ2Q9BYK8 2649 aaKnown RBP9.79□□□□□ -0.84
COPS4-205ENST00000507376 ZNF638Q14966 1978 aaKnown RBP9.79□□□□□ -0.84
COPS4-205ENST00000507376 CCDC196A0A1B0GTZ2 297 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 SOBPA7XYQ1 873 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 CDX4O14627 284 aaPredicted RBP9.78□□□□□ -0.84
COPS4-205ENST00000507376 N4BP3O15049 544 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 CHADO15335 359 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 RNF40O75150 1001 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 MED24O75448 989 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 HARSP12081 509 aaKnown RBP9.78□□□□□ -0.84
COPS4-205ENST00000507376 CPB1P15086 417 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 ARSAP15289 507 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 ELF1P32519 619 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 CNR2P34972 360 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 GUCY2FP51841 1108 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 FAM193AP78312 1265 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 SPAG1Q07617 926 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 AAMPQ13685 434 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 MRPL58Q14197 206 aaKnown RBP9.78□□□□□ -0.84
COPS4-205ENST00000507376 UAP1L1Q3KQV9 507 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 CYP4A22Q5TCH4 519 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 TMCO4Q5TGY1 634 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 KRT25Q7Z3Z0 450 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 YAF2Q8IY57 180 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 FAM20AQ96MK3 541 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 LPIN3Q9BQK8 851 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 CDT1Q9H211 546 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 CCL26Q9Y258 94 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 SLC27A5Q9Y2P5 690 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 PPME1Q9Y570 386 aa9.78□□□□□ -0.84
COPS4-205ENST00000507376 ASH1LQ9NR48 2969 aaKnown RBP9.78□□□□□ -0.84
COPS4-205ENST00000507376 CCDC194A0A1B0GVG4 234 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 PPEF2O14830 753 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 SPATA31C1P0DKV0 1188 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 NMT1P30419 496 aaKnown RBP9.77□□□□□ -0.85
COPS4-205ENST00000507376 POU5F1BQ06416 359 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 SSRP1Q08945 709 aaKnown RBP9.77□□□□□ -0.85
COPS4-205ENST00000507376 NCBP1Q09161 790 aaKnown RBP9.77□□□□□ -0.85
COPS4-205ENST00000507376 PCBP1Q15365 356 aaKnown RBP eCLIP9.77□□□□□ -0.85
COPS4-205ENST00000507376 FAM187BQ17R55 369 aa9.77□□□□□ -0.85
COPS4-205ENST00000507376 DGKKQ5KSL6 1271 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms