RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 CCDC15Q0P6D6 951 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 SFSWAPQ12872 951 aaKnown RBP9.99□□□□□ -0.81
NEK1-203ENST00000507142 GRIK3Q13003 919 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 SNX1Q13596 522 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 NPAS4Q8IUM7 802 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 SENP8Q96LD8 212 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 EIF3CQ99613 913 aaKnown RBP9.99□□□□□ -0.81
NEK1-203ENST00000507142 CIPCQ9C0C6 399 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 SLC12A8A0AV02 714 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 KPNA7A9QM74 516 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 H0YHG0 523 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 GLUD2P49448 558 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 PTENP60484 403 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 CYP24A1Q07973 514 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 EFHC1Q5JVL4 640 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 C10orf76Q5T2E6 689 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 VPS52Q8N1B4 723 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 ATP6V0D2Q8N8Y2 350 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 CPA5Q8WXQ8 436 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 TMEM134Q9H6X4 195 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 GTF2IRD1Q9UHL9 959 aa9.99□□□□□ -0.81
NEK1-203ENST00000507142 CCNE2O96020 404 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 ACADMP11310 421 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 CUL2Q13617 745 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 KRT12Q99456 494 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 TMEM117Q9H0C3 514 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 TLR8Q9NR97 1041 aaKnown RBP9.98□□□□□ -0.81
NEK1-203ENST00000507142 TNFSF13BQ9Y275 285 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 INSL6Q9Y581 213 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 FTLP02792 175 aaPredicted RBP9.98□□□□□ -0.81
NEK1-203ENST00000507142 GDF6Q6KF10 455 aaPredicted RBP9.98□□□□□ -0.81
NEK1-203ENST00000507142 RHOT2Q8IXI1 618 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 ZBTB10Q96DT7 871 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 FSD1LQ9BXM9 530 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 TSPYL1Q9H0U9 437 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 ABCF3Q9NUQ8 709 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 CLDND1Q9NY35 253 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 FRMPD4Q14CM0 1322 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 RNASEH1O60930 286 aaKnown RBP9.98□□□□□ -0.81
NEK1-203ENST00000507142 ATXN3P54252 364 aaPredicted RBP9.98□□□□□ -0.81
NEK1-203ENST00000507142 GJA9P57773 515 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 TCF25Q9BQ70 676 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 NUP85Q9BW27 656 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 HAUS4Q9H6D7 363 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 PARVAQ9NVD7 372 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 PCDHB8Q9UN66 801 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 ABHD14A-ACY1A0A1B0GW23 586 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 FAM47DPA6NHR8 397 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 B4GALT5O43286 388 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 MAPTP10636 758 aaKnown RBP9.98□□□□□ -0.81
NEK1-203ENST00000507142 HAS1Q92839 578 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 IP6K2Q9UHH9 426 aa9.98□□□□□ -0.81
NEK1-203ENST00000507142 ASMTLO95671 621 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 CARNMT1Q8N4J0 409 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 N4BP2L2Q92802 583 aaPredicted RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 PNMA5Q96PV4 448 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 HYOU1Q9Y4L1 999 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 C5P01031 1676 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 STAMBPO95630 424 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 SNAI1O95863 264 aaPredicted RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 FGFR1P11362 822 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 ARHGAP1Q07960 439 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 ZNF177Q13360 481 aaPredicted RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 TFDP2Q14188 446 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 STARD3Q14849 445 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 DCLRE1AQ6PJP8 1040 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 CAPN12Q6ZSI9 719 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 ANO5Q75V66 913 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 GET4Q7L5D6 327 aaPredicted RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 MMTAG2Q9BU76 263 aaKnown RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 LCMT1Q9UIC8 334 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 SLU7O95391 586 aaKnown RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 MYBL1P10243 752 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 PPARGP37231 505 aaPredicted RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 BASP1P80723 227 aaKnown RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 LGSNQ5TDP6 509 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 SLC30A5Q8TAD4 765 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 SMG7Q92540 1137 aaKnown RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 MRFAP1L1Q96HT8 127 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 MTMR9Q96QG7 549 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 AGPAT1Q99943 283 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 PTPN18Q99952 460 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 STMN4Q9H169 189 aaPredicted RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 PLCB1Q9NQ66 1216 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 WDR35Q9P2L0 1181 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 PFKMP08237 780 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 YWHAQP27348 245 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 RFC2P35250 354 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 PURAQ00577 322 aaKnown RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 LMNB2Q03252 620 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 THOC5Q13769 683 aaKnown RBP9.97□□□□□ -0.81
NEK1-203ENST00000507142 MMS22LQ6ZRQ5 1243 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 NT5DC4Q86YG4 428 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 MS4A4AQ96JQ5 239 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 TTPALQ9BTX7 342 aa9.97□□□□□ -0.81
NEK1-203ENST00000507142 F5H5T6 163 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 SLC2A3P11169 496 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 ATF2P15336 505 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 PMLP29590 882 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms