RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 BRSK2Q8IWQ3 736 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 CD302Q8IX05 232 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 APPL2Q8NEU8 664 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 FLCNQ8NFG4 579 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 MCRS1Q96EZ8 462 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 CORO1BQ9BR76 489 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 TNMDQ9H2S6 317 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 ASB7Q9H672 318 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 DPP3Q9NY33 737 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 AFF4Q9UHB7 1163 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 DERAQ9Y315 318 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 RIF1Q5UIP0 2472 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 PATJQ8NI35 1801 aa18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 NUP210Q8TEM1 1887 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-215ENST00000506161 FAM186AA6NE01 2351 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 MTMR11A4FU01 709 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 PRRG1O14668 218 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 POLR2DO15514 142 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 FCARP24071 287 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 TWF1Q12792 350 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 RESP18Q5W5W9 173 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 TPGS2Q68CL5 300 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 LMBRD2Q68DH5 695 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 EPM2AIP1Q7L775 607 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 LRRC3Q9BY71 257 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 SLC27A5Q9Y2P5 690 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 C2CD2Q9Y426 696 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 YIPF1Q9Y548 306 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 DCHS1Q96JQ0 3298 aa18.11■□□□□ 0.49
PDLIM7-215ENST00000506161 DMDP11532 3685 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 PTPRDP23468 1912 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 GREB1Q4ZG55 1949 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 TGFB1I1O43294 461 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 HCRTO43612 131 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 LRG1P02750 347 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 SRFP11831 508 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 TYMPP19971 482 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 GPC5P78333 572 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 ASIC1P78348 528 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 DUSP4Q13115 394 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 CUL4BQ13620 913 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 CCDC142Q17RM4 750 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 ASTLQ6HA08 431 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 OVOS1Q6IE37 1185 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 LRRTM3Q86VH5 581 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 C1orf127Q8N9H9 656 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 ATAD1Q8NBU5 361 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 ZSWIM3Q96MP5 696 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 C7orf25Q9BPX7 421 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 PDE11AQ9HCR9 933 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 SIX4Q9UIU6 781 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 RCOR1Q9UKL0 485 aa18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 MRPS23Q9Y3D9 190 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-215ENST00000506161 XPOTO43592 962 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 LRRN2O75325 713 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 CYP11A1P05108 521 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 PTPN2P17706 415 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 GARTP22102 1010 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 ELF1P32519 619 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 ABCD1P33897 745 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 WSCD1Q658N2 575 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 CNNM4Q6P4Q7 775 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 TMC8Q8IU68 726 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 CBWD2Q8IUF1 395 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 SYCP3Q8IZU3 236 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 NOC3LQ8WTT2 800 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 TSPAN18Q96SJ8 248 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 PYM1Q9BRP8 204 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 ZNF334Q9HCZ1 680 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 AVENQ9NQS1 362 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 SERTAD1Q9UHV2 236 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 FBXL21Q9UKT6 434 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 EXOC7Q9UPT5 735 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 PCDHB13Q9Y5F0 798 aa18.09■□□□□ 0.49
PDLIM7-215ENST00000506161 SHISA7A6NL88 538 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 CYB561D2O14569 222 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 ACTN4O43707 911 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 KLRC4O43908 158 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 EXTL3O43909 919 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 ITGB3P05106 788 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 POLR2BP30876 1174 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 AFMP43652 599 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 ME1P48163 572 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 TAF6P49848 677 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 TFAMQ00059 246 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 GPR17Q13304 367 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 POSTNQ15063 836 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 TANGO2Q6ICL3 276 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 CENPPQ6IPU0 288 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 RTL10Q7L3V2 364 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 STKLD1Q8NE28 680 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 OR5B17Q8NGF7 314 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 GZF1Q9H116 711 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 TMLHEQ9NVH6 421 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 RBAKQ9NYW8 714 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 WNT16Q9UBV4 365 aa18.08■□□□□ 0.48
PDLIM7-215ENST00000506161 KCNH3Q9ULD8 1083 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms