RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 TMEM209Q96SK2 561 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 LRRC3Q9BY71 257 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 OXCT2Q9BYC2 517 aaPredicted RBP12.35□□□□□ -0.43
SIL1-208ENST00000505945 DNAJC25Q9H1X3 360 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 LMAN1LQ9HAT1 526 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 TRPV4Q9HBA0 871 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 PARVGQ9HBI0 331 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 TRPV5Q9NQA5 729 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 BLOC1S4Q9NUP1 217 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 NCDNQ9UBB6 729 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 PIAS3Q9Y6X2 628 aa12.35□□□□□ -0.43
SIL1-208ENST00000505945 DNAH14Q0VDD8 3507 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 NCOR2Q9Y618 2525 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 ANKRD63C9JTQ0 380 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 LILRB5O75023 590 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 SOAT2O75908 522 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 KRT18P05783 430 aaKnown RBP12.34□□□□□ -0.43
SIL1-208ENST00000505945 PLCG1P19174 1290 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 TYMPP19971 482 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 NMT1P30419 496 aaKnown RBP12.34□□□□□ -0.43
SIL1-208ENST00000505945 ALDH1A3P47895 512 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 ACOT2P49753 483 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 CDR1P51861 262 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 ZNF131P52739 623 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 KARSQ15046 597 aaKnown RBP12.34□□□□□ -0.43
SIL1-208ENST00000505945 STXBP5Q5T5C0 1151 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
SIL1-208ENST00000505945 DGLUCYQ7Z3D6 616 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 DNAJB7Q7Z6W7 309 aaPredicted RBP12.34□□□□□ -0.43
SIL1-208ENST00000505945 TMC8Q8IU68 726 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 MFSD6LQ8IWD5 586 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 TTC9BQ8N6N2 239 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 RASSF8Q8NHQ8 419 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 BORCS6Q96GS4 357 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 SENP8Q96LD8 212 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 TSPAN18Q96SJ8 248 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 MSTO1Q9BUK6 570 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 GPR88Q9GZN0 384 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 PRMT8Q9NR22 394 aaPredicted RBP12.34□□□□□ -0.43
SIL1-208ENST00000505945 CPSF3Q9UKF6 684 aaKnown RBP12.34□□□□□ -0.43
SIL1-208ENST00000505945 SMC3Q9UQE7 1217 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.34□□□□□ -0.43
SIL1-208ENST00000505945 TICRRQ7Z2Z1 1910 aa12.34□□□□□ -0.43
SIL1-208ENST00000505945 MTMR11A4FU01 709 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 TISP43B9A030 160 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 ARNTLO00327 626 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 SLC26A4O43511 780 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 NFICP08651 508 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 SCP2P22307 547 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 CCNE1P24864 410 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 PLD1Q13393 1074 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 MYBPC2Q14324 1141 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 PUM1Q14671 1186 aaKnown RBP eCLIP12.33□□□□□ -0.44
SIL1-208ENST00000505945 ZC2HC1CQ53FD0 456 aaPredicted RBP12.33□□□□□ -0.44
SIL1-208ENST00000505945 C9orf57Q5W0N0 161 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 ARMCX5Q6P1M9 558 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 ARID3BQ8IVW6 561 aaPredicted RBP12.33□□□□□ -0.44
SIL1-208ENST00000505945 CD302Q8IX05 232 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 YAF2Q8IY57 180 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 RAD54LQ92698 747 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 FIZ1Q96SL8 496 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 IKZF4Q9H2S9 585 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 CHRDQ9H2X0 955 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 SPTBN2O15020 2390 aa12.33□□□□□ -0.44
SIL1-208ENST00000505945 MED19A0JLT2 244 aaPredicted RBP12.32□□□□□ -0.44
SIL1-208ENST00000505945 ANO9A1A5B4 782 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 PIRO00625 290 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
SIL1-208ENST00000505945 CHRNB1P11230 501 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 ODC1P11926 461 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 LONP1P36776 959 aaKnown RBP12.32□□□□□ -0.44
SIL1-208ENST00000505945 GTF2BQ00403 316 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 TMEM132DQ14C87 1099 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 SF3A1Q15459 793 aaKnown RBP12.32□□□□□ -0.44
SIL1-208ENST00000505945 ADALQ6DHV7 355 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 GAREM2Q75VX8 874 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 OR10T2Q8NGX3 314 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 TTC8Q8TAM2 541 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 CSGALNACT1Q8TDX6 532 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 PSMG2Q969U7 264 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 E2F7Q96AV8 911 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 LRRC3BQ96PB8 259 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 MKNK1Q9BUB5 465 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 FAM126AQ9BYI3 521 aaPredicted RBP12.32□□□□□ -0.44
SIL1-208ENST00000505945 EPC1Q9H2F5 836 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 ATXN3LQ9H3M9 355 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 DLL3Q9NYJ7 618 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 SMG5Q9UPR3 1016 aaKnown RBP12.32□□□□□ -0.44
SIL1-208ENST00000505945 ASB3Q9Y575 518 aa12.32□□□□□ -0.44
SIL1-208ENST00000505945 ANK1P16157 1881 aa12.31□□□□□ -0.44
SIL1-208ENST00000505945 COL4A2P08572 1712 aa12.31□□□□□ -0.44
SIL1-208ENST00000505945 SLC38A8A6NNN8 435 aa12.31□□□□□ -0.44
SIL1-208ENST00000505945 CHADO15335 359 aa12.31□□□□□ -0.44
SIL1-208ENST00000505945 TDGF1P13385 188 aa12.31□□□□□ -0.44
SIL1-208ENST00000505945 GABRR2P28476 465 aa12.31□□□□□ -0.44
SIL1-208ENST00000505945 DDIT3P35638 169 aa12.31□□□□□ -0.44
SIL1-208ENST00000505945 SOX9P48436 509 aa12.31□□□□□ -0.44
SIL1-208ENST00000505945 KPNA1P52294 538 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms