RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 FBXO34Q9NWN3 711 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 C14orf119Q9NWQ9 140 aa6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.33□□□□□ -1.4
DEPDC1B-203ENST00000505017 PLEKHH1Q9ULM0 1364 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 NWD1Q149M9 1564 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 CDC42BPGQ6DT37 1551 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 MAST3O60307 1309 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 TLDC2A0PJX2 215 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 CDKL5O76039 1030 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 ESRRBO95718 433 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 SPATA31D3P0C874 917 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 HKR1P10072 659 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 ECHS1P30084 290 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 ZNF362Q5T0B9 420 aaPredicted RBP6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 CC2D1BQ5T0F9 858 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 SPATA31D4Q6ZUB0 917 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 PNISRQ8TF01 805 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 FATE1Q969F0 183 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 RBM12Q9NTZ6 932 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 FAM30AQ9NZY2 134 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 ATP11BQ9Y2G3 1177 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 TOPAZ1Q8N9V7 1692 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 CPSF1Q10570 1443 aaKnown RBP6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 ANKARQ7Z5J8 1434 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 KIF20BQ96Q89 1820 aa6.32□□□□□ -1.4
DEPDC1B-203ENST00000505017 A0A1W2PP64 1363 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 AATKQ6ZMQ8 1374 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 AKAP12Q02952 1782 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 MON2Q7Z3U7 1717 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 NKTRP30414 1462 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 CD163L1Q9NR16 1453 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 A0A1B0GTW7 788 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 MGST3O14880 152 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 PRKD3O94806 890 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 ZFPL1O95159 310 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 ITGAMP11215 1152 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 PPP2R1AP30153 589 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 MTNR1BP49286 362 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 MUM1L1Q5H9M0 696 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 RRP12Q5JTH9 1297 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 SLC44A3Q8N4M1 653 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 FUBP3Q96I24 572 aaKnown RBP eCLIP6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 ACE2Q9BYF1 805 aaPredicted RBP6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 PTGFRNQ9P2B2 879 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 AJAP1Q9UKB5 411 aaPredicted RBP6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 COX11Q9Y6N1 276 aa6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 EDC4Q6P2E9 1401 aaKnown RBP6.31□□□□□ -1.4
DEPDC1B-203ENST00000505017 ZBED9Q6R2W3 1325 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 MASP2O00187 686 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 AMY1AP04745 511 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 HLA-DOAP06340 250 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 FGFR4P22455 802 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 GCSHP23434 173 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 C21orf58P58505 322 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 ERVK-21P61565 698 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 TMPRSS15P98073 1019 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 MALLQ13021 153 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 ANO4Q32M45 955 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 CCDC184Q52MB2 194 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 OTUD7BQ6GQQ9 843 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 FBXO42Q6P3S6 717 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 ZGPATQ8N5A5 531 aaKnown RBP6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 COG1Q8WTW3 980 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 CAVIN3Q969G5 261 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 CCM2LQ9NUG4 571 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 USP25Q9UHP3 1055 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 ACTL7AQ9Y615 435 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 PPIP5K1Q6PFW1 1433 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 NCOA3Q9Y6Q9 1424 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 FMN2Q9NZ56 1722 aa6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 POLR3AO14802 1390 aaPredicted RBP6.3□□□□□ -1.4
DEPDC1B-203ENST00000505017 BRINP1O60477 761 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 RAP2AP10114 183 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 OSMP13725 252 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 ZNF37AP17032 561 aaPredicted RBP6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 AVPR1BP47901 424 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 CXADRP78310 365 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 UBXN2BQ14CS0 331 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 NOMO1Q15155 1222 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 DRC7Q8IY82 874 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 FAM9BQ8IZU0 186 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 NGEFQ8N5V2 710 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 Q96MF0 132 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 SLC2A13Q96QE2 648 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 ALOXE3Q9BYJ1 711 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 ADGRL3Q9HAR2 1447 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 TMEM74BQ9NUR3 256 aa6.29□□□□□ -1.4
DEPDC1B-203ENST00000505017 BLMP54132 1417 aaPredicted RBP6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 GSPT1P15170 499 aaKnown RBP6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 HSD3B2P26439 372 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 HSD11B2P80365 405 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 ATP8B2P98198 1209 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 MGAT2Q10469 447 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 STRIP1Q5VSL9 837 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 ZNF529Q6P280 563 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 UBE3BQ7Z3V4 1068 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 CHAC2Q8WUX2 184 aa6.28□□□□□ -1.4
DEPDC1B-203ENST00000505017 CFAP53Q96M91 514 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms