RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 HSFX1Q9UBD0 423 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 AFF4Q9UHB7 1163 aaKnown RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 DACH1Q9UI36 760 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
GYPB-204ENST00000504951 ASB3Q9Y575 518 aa6.63□□□□□ -1.35
GYPB-204ENST00000504951 NBEAQ8NFP9 2946 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 IGSF10Q6WRI0 2623 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 INO80B-WBP1J3KQ70 363 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 EML1O00423 815 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 KHNYNO15037 678 aaKnown RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 N4BP3O15049 544 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 CHMP2AO43633 222 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 EXTL3O43909 919 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 B3GAT3O94766 335 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 HMGB1P09429 215 aaKnown RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 CCDC192P0DO97 292 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 RPL9P32969 192 aaKnown RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 HOXD12P35452 270 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 VIPR2P41587 438 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 KPNA1P52294 538 aaPredicted RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 LMAN2Q12907 356 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 ZNF423Q2M1K9 1284 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 PLA2G4FQ68DD2 849 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 CDCA2Q69YH5 1023 aaPredicted RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 HEATR6Q6AI08 1181 aaKnown RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 ALKAL1Q6UXT8 129 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 Q6ZS52 159 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 Q6ZUG5 572 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 SYT13Q7L8C5 426 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 HAUS6Q7Z4H7 955 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 PDZD3Q86UT5 571 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 YAF2Q8IY57 180 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 DAGLBQ8NCG7 672 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 TBCKQ8TEA7 893 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 KCNB2Q92953 911 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 BRF1Q92994 677 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 EXOC4Q96A65 974 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 HSD17B14Q9BPX1 270 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 ASAH2Q9NR71 780 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 RBM12Q9NTZ6 932 aaKnown RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 VPS54Q9P1Q0 977 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 CEP72Q9P209 647 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 WRAP73Q9P2S5 460 aaPredicted RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 PARP2Q9UGN5 583 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 VAV3Q9UKW4 847 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 SLC8A2Q9UPR5 921 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 INSL5Q9Y5Q6 135 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 ASCC3Q8N3C0 2202 aaKnown RBP6.62□□□□□ -1.35
GYPB-204ENST00000504951 TICRRQ7Z2Z1 1910 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 ITPR1Q14643 2758 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 MAST4O15021 2626 aa6.62□□□□□ -1.35
GYPB-204ENST00000504951 LAMA1P25391 3075 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 AKAP13Q12802 2813 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 NCANO14594 1321 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 CCDC194A0A1B0GVG4 234 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 CASTOR2A6NHX0 329 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 PRRG1O14668 218 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 DTNBO60941 627 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 SLITRK3O94933 977 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 SEC24AO95486 1093 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 NPTXRO95502 500 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 TOP3BO95985 862 aaKnown RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 GCFC2P16383 781 aaKnown RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 IFNAR1P17181 557 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 DRD1P21728 446 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 GLRA2P23416 452 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 TKTP29401 623 aaKnown RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 EVCP57679 992 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 CCT2P78371 535 aaKnown RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 FGD1P98174 961 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 GRSF1Q12849 480 aaKnown RBP eCLIP6.61□□□□□ -1.35
GYPB-204ENST00000504951 SEMA3BQ13214 749 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 PLD1Q13393 1074 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 CAPSQ13938 189 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 ITPRIPL2Q3MIP1 535 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 PEAR1Q5VY43 1037 aaPredicted RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 PMS2CLQ68D20 193 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 RAB44Q7Z6P3 723 aaPredicted RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 TMC8Q8IU68 726 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 ARID3BQ8IVW6 561 aaPredicted RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 SHKBP1Q8TBC3 707 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 FAM200AQ8TCP9 573 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 RSPRY1Q96DX4 576 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 JAKMIP1Q96N16 626 aaKnown RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 LRRC3BQ96PB8 259 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 FAM83CQ9BQN1 747 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 LXNQ9BS40 222 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 MKNK1Q9BUB5 465 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 AGXT2Q9BYV1 514 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 CYP4F11Q9HBI6 524 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 NCOA5Q9HCD5 579 aaKnown RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 PRDM9Q9NQV7 894 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 IGSF5Q9NSI5 407 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 KLK14Q9P0G3 267 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.61□□□□□ -1.35
GYPB-204ENST00000504951 SNX14Q9Y5W7 946 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 ARID2Q68CP9 1835 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 ASXL3Q9C0F0 2248 aa6.61□□□□□ -1.35
GYPB-204ENST00000504951 ACACAQ13085 2346 aa6.6□□□□□ -1.35
GYPB-204ENST00000504951 SLC38A8A6NNN8 435 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms