RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 ATF7P17544 494 aaPredicted RBP14.17□□□□□ -0.14
LMNA-220ENST00000504687 LRPAP1P30533 357 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 CTCFP49711 727 aaPredicted RBP14.17□□□□□ -0.14
LMNA-220ENST00000504687 GSCP56915 257 aaPredicted RBP14.17□□□□□ -0.14
LMNA-220ENST00000504687 DSC3Q14574 896 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 STILQ15468 1287 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 FAM47CQ5HY64 1035 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 FBXO47Q5MNV8 452 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 PPP1R13LQ8WUF5 828 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 ELMO3Q96BJ8 720 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 GDAP2Q9NXN4 497 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 BARX2Q9UMQ3 279 aaPredicted RBP14.17□□□□□ -0.14
LMNA-220ENST00000504687 COG5Q9UP83 839 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 GIT1Q9Y2X7 761 aa14.17□□□□□ -0.14
LMNA-220ENST00000504687 A0A0U1RQG5 324 aaPredicted RBP14.16□□□□□ -0.14
LMNA-220ENST00000504687 TMCO5BA8MYB1 307 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 INPPL1O15357 1258 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 THAP12O43422 761 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 BUB1BO60566 1050 aaPredicted RBP14.16□□□□□ -0.14
LMNA-220ENST00000504687 SKIP12755 728 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 ABCB4P21439 1286 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 PAX3P23760 479 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 NSFP46459 744 aaKnown RBP14.16□□□□□ -0.14
LMNA-220ENST00000504687 RAD23BP54727 409 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 PTP4A2Q12974 167 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 RPS6KA1Q15418 735 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 CLUL1Q15846 466 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 C9orf57Q5W0N0 161 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 DPH6Q7L8W6 267 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 PEX26Q7Z412 305 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 UNC93AQ86WB7 457 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 TMEM35BQ8NCS4 154 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 WHAMMQ8TF30 809 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 ZNF560Q96MR9 790 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 SDCBP2Q9H190 292 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 OSGEPQ9NPF4 335 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 FAM105AQ9NUU6 356 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 AMFRQ9UKV5 643 aa14.16□□□□□ -0.14
LMNA-220ENST00000504687 TTC7AQ9ULT0 858 aaPredicted RBP14.16□□□□□ -0.14
LMNA-220ENST00000504687 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
LMNA-220ENST00000504687 TLR3O15455 904 aaKnown RBP14.15□□□□□ -0.14
LMNA-220ENST00000504687 WEE2P0C1S8 567 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 VDRP11473 427 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 MMP8P22894 467 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 TNNC1P63316 161 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 CNGA2Q16280 664 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 LIN9Q5TKA1 542 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 TWF2Q6IBS0 349 aaKnown RBP14.15□□□□□ -0.14
LMNA-220ENST00000504687 PLEKHA7Q6IQ23 1121 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 DAAM2Q86T65 1068 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 RASGEF1CQ8N431 466 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 SLC4A11Q8NBS3 891 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 MSANTD4Q8NCY6 345 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 LRRN4CLQ8ND94 238 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 ACTRT1Q8TDG2 376 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 RUBCNQ92622 972 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 ZNF653Q96CK0 615 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 CYFIP2Q96F07 1278 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 TMEM176AQ96HP8 235 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 PPP1R10Q96QC0 940 aaKnown RBP14.15□□□□□ -0.14
LMNA-220ENST00000504687 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.15□□□□□ -0.14
LMNA-220ENST00000504687 MRPL47Q9HD33 250 aaKnown RBP14.15□□□□□ -0.14
LMNA-220ENST00000504687 UBN1Q9NPG3 1134 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 PAK6Q9NQU5 681 aaPredicted RBP14.15□□□□□ -0.14
LMNA-220ENST00000504687 SLC38A7Q9NVC3 462 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 CTTNBP2NLQ9P2B4 639 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 NXF1Q9UBU9 619 aaKnown RBP14.15□□□□□ -0.14
LMNA-220ENST00000504687 CNOT8Q9UFF9 292 aaKnown RBP14.15□□□□□ -0.14
LMNA-220ENST00000504687 POLIQ9UNA4 740 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 HES2Q9Y543 173 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 SCINQ9Y6U3 715 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 SCN1AP35498 2009 aa14.15□□□□□ -0.14
LMNA-220ENST00000504687 A0A1W2PQ45 241 aaPredicted RBP14.14□□□□□ -0.15
LMNA-220ENST00000504687 A0A1W2PQY0 241 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 ARVCFO00192 962 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 DNM1LO00429 736 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 FTCDO95954 541 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 CALB1P05937 261 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 ZSCAN20P17040 1043 aaPredicted RBP14.14□□□□□ -0.15
LMNA-220ENST00000504687 THPOP40225 353 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 SLC1A1P43005 524 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 PAFAH1B1P43034 410 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 CDK7P50613 346 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 TAP1Q03518 808 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 LPIN1Q14693 890 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 ERCC6LQ2NKX8 1250 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 CFAP221Q4G0U5 840 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 NAA35Q5VZE5 725 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 DNAAF5Q86Y56 855 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 MMGT1Q8N4V1 131 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 ZNF564Q8TBZ8 553 aaPredicted RBP14.14□□□□□ -0.15
LMNA-220ENST00000504687 CAGE1Q8TC20 777 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 COG1Q8WTW3 980 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 CD101Q93033 1021 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 MMS19Q96T76 1030 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 ZSWIM1Q9BR11 485 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 SELENOOQ9BVL4 669 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 DNAI2Q9GZS0 605 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 CARD9Q9H257 536 aa14.14□□□□□ -0.15
LMNA-220ENST00000504687 PDCL3Q9H2J4 239 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms