RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 BARX2Q9UMQ3 279 aaPredicted RBP12.75□□□□□ -0.37
POLR2J3-210ENST00000504677 POLIQ9UNA4 740 aa12.75□□□□□ -0.37
POLR2J3-210ENST00000504677 ARL5CA6NH57 179 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 MGEA5O60502 916 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 WEE2P0C1S8 567 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 FAM163BP0C2L3 166 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 MYBL1P10243 752 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 RPL9P32969 192 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 LBX1P52954 281 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 GALCP54803 685 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 MBTPS1Q14703 1052 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 TCEAL1Q15170 157 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 STILQ15468 1287 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 ZNF598Q86UK7 904 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 ECHDC2Q86YB7 292 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 RHOT2Q8IXI1 618 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 DDX27Q96GQ7 796 aaKnown RBP12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 UROC1Q96N76 676 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 WDR24Q96S15 920 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 GAD1Q99259 594 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 PACSIN1Q9BY11 444 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 ZNF518BQ9C0D4 1074 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 GDAP2Q9NXN4 497 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 PCDHGC3Q9UN70 934 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 CEP83Q9Y592 693 aa12.74□□□□□ -0.37
POLR2J3-210ENST00000504677 TDRD15B5MCY1 1934 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 KPNA7A9QM74 516 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 C9IYK1 514 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 CYP1A1P04798 512 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 HSPA1AP0DMV8 641 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 HSPA1BP0DMV9 641 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 NSFP46459 744 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 NAP1L1P55209 391 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 GPC5P78333 572 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 FAM189BP81408 668 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 CENPCQ03188 943 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 PLEKHG4Q58EX7 1191 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 SCARA3Q6AZY7 606 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 ACAD10Q6JQN1 1059 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 GLB1LQ6UWU2 654 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 UNC93AQ86WB7 457 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 SYCE1Q8N0S2 351 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 TOP6BLQ8N6T0 577 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 ZFP42Q96MM3 310 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 PCDHB18PQ96TA0 734 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 OSBPL7Q9BZF2 842 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 IRX2Q9BZI1 471 aaPredicted RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 SDCBP2Q9H190 292 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 CXCL16Q9H2A7 254 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 HIPK3Q9H422 1215 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 ELAC1Q9H777 363 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 PUF60Q9UHX1 559 aaKnown RBP12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 GTF3C4Q9UKN8 822 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 TFR2Q9UP52 801 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 JRKLQ9Y4A0 524 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 PCDHGC5Q9Y5F6 944 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 SNX9Q9Y5X1 595 aa12.73□□□□□ -0.37
POLR2J3-210ENST00000504677 SCN1AP35498 2009 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 ARHGEF37A1IGU5 675 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 TMCO5BA8MYB1 307 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 HOXA2O43364 376 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 HUS1O60921 280 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 CAPN15O75808 1086 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 MOCS3O95396 460 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 ABL1P00519 1130 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 VDRP11473 427 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 UNGP13051 313 aaPredicted RBP12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 CDH5P33151 784 aaPredicted RBP12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 RFC2P35250 354 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 RAP1GAPP47736 663 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 SCNN1GP51170 649 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 ATN1P54259 1190 aaPredicted RBP12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 RAD23BP54727 409 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 HADHBP55084 474 aaKnown RBP12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 NOMO3P69849 1222 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 SOX4Q06945 474 aaPredicted RBP12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 TRIM60Q495X7 471 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 RNF169Q8NCN4 708 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 TMEM35BQ8NCS4 154 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 MSANTD4Q8NCY6 345 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 GSTCDQ8NEC7 633 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 APPL2Q8NEU8 664 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 SPATA18Q8TC71 538 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 URGCPQ8TCY9 931 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 ZNF606Q8WXB4 792 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 LPPQ93052 612 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 TMEM176AQ96HP8 235 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 VCPIP1Q96JH7 1222 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 C11orf49Q9H6J7 331 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 L2HGDHQ9H9P8 463 aa12.72□□□□□ -0.37
POLR2J3-210ENST00000504677 ACP6Q9NPH0 428 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms